Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 OR10G5P-201ENST00000532733 358 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC092490.3-201ENST00000545370 572 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AL392112.1-201ENST00000605115 829 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC015726.3-201ENST00000624501 418 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC021242.1-201ENST00000507315 2035 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 AC138393.1-206ENST00000540997 1886 ntBASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP3Q96JB5 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC096656.1-201ENST00000623826 1364 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 LRRC37BP1-201ENST00000398851 714 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 FCF1P5-201ENST00000406490 482 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 Z75741.2-201ENST00000417272 1167 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 BX323845.1-201ENST00000432417 179 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 TXNP5-201ENST00000441043 315 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 TCEA1P3-201ENST00000443005 880 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AP000942.1-201ENST00000463969 747 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 HMGN2P25-201ENST00000486956 268 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC006499.3-201ENST00000506077 748 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 OR4A2P-201ENST00000527276 913 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC023050.2-201ENST00000544968 387 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 NMNAT1P1-201ENST00000554095 876 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 MTND4LP24-201ENST00000572277 291 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC011447.4-201ENST00000587562 111 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 VN1R83P-201ENST00000595685 445 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AL008729.2-201ENST00000606393 473 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC009163.6-201ENST00000612367 342 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AL158163.2-201ENST00000619110 700 ntBASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP3Q96JB5 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 SNURFL-201ENST00000309296 343 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 SNORA70.10-201ENST00000384515 134 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 SNORA77-201ENST00000408716 125 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 RN7SKP16-201ENST00000410180 299 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 RNU6-603P-201ENST00000411403 107 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC007738.1-201ENST00000413892 348 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC027644.1-201ENST00000419595 298 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC005033.1-201ENST00000428904 813 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms