Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 AC008562.1-201ENST00000521763 330 ntBASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 AL161713.1-201ENST00000555538 145 ntBASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 RN7SL176P-201ENST00000580352 264 ntBASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 AC115621.1-201ENST00000604653 858 ntBASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 MAPK10-303ENST00000641324 3959 ntBASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 OR51H2P-202ENST00000641424 3046 ntBASIC4.54□□□□□ -1.68
PDLIM5Q96HC4 AL139811.1-201ENST00000424779 2299 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 RNU2-65P-201ENST00000410162 185 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AL357078.2-201ENST00000416486 427 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 CYCSP10-201ENST00000417973 294 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 MORF4L1P7-201ENST00000426038 703 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC023347.2-201ENST00000433994 462 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC074367.1-201ENST00000438685 1125 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 ARL4AP3-201ENST00000441452 574 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 ATP5G1P3-201ENST00000463301 410 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 RN7SL817P-201ENST00000480777 288 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC011005.3-201ENST00000491624 395 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC112206.4-201ENST00000515142 405 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 RNU2-30P-201ENST00000516209 141 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 SNORA26.10-201ENST00000516427 141 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AP001922.4-201ENST00000526967 290 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AL136520.1-202ENST00000555494 763 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC122134.1-202ENST00000569111 1201 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AL671309.1-201ENST00000603750 544 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC087283.1-201ENST00000604029 1074 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AL031320.1-201ENST00000604177 357 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC008966.2-201ENST00000606157 453 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC245389.2-201ENST00000616023 576 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC243756.2-201ENST00000618406 463 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC242843.1-201ENST00000618702 573 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 MIR6853-201ENST00000619642 74 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AL355480.1-201ENST00000629041 99 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 AC131971.1-201ENST00000332881 1482 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 MTCO1P18-201ENST00000455518 1419 ntBASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM5Q96HC4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC100871.1-201ENST00000507871 1456 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 RNU6-650P-201ENST00000365658 111 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 RNA5SP146-201ENST00000410743 123 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AL450992.3-201ENST00000413192 568 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AL121882.1-201ENST00000422893 417 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 PNRC2P1-201ENST00000423940 420 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC005189.1-201ENST00000431286 310 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC105402.2-201ENST00000438503 358 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 RPS7P5-201ENST00000441482 581 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AL353718.1-201ENST00000451028 517 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 RPS3AP41-201ENST00000462701 778 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 RPL23AP73-201ENST00000492507 471 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms