Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL035404.1-201ENST00000497982 568 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 NDUFB5P1-201ENST00000508134 564 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 RPS27AP18-201ENST00000515536 459 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC068714.1-201ENST00000559623 800 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC090751.1-201ENST00000566966 267 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 MIR4691-201ENST00000583764 85 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AL035411.2-201ENST00000604022 421 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC009237.15-201ENST00000610252 501 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AL353726.1-201ENST00000614041 1000 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC100827.5-201ENST00000615883 426 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC023509.5-201ENST00000617434 807 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 VN1R7P-201ENST00000619242 903 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC068870.2-201ENST00000620635 389 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 PANDAR-201ENST00000629595 1506 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.44
CHMP4CQ96CF2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AC103591.2-201ENST00000265259 766 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 RN7SKP104-201ENST00000362605 328 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 RNA5SP305-201ENST00000362665 119 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 RNU1-87P-201ENST00000363727 170 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 MIR513B-201ENST00000385136 84 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 MIR550A3-201ENST00000390735 95 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 RN7SKP125-201ENST00000410481 302 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 RNU6-77P-201ENST00000410554 91 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AC092447.3-201ENST00000426027 686 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AP001324.1-201ENST00000428553 399 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 BX323845.1-201ENST00000432417 179 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AL161747.1-201ENST00000480068 358 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 RN7SL97P-201ENST00000486780 299 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 NIFKP7-201ENST00000503365 834 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 IGKV2-36-201ENST00000519999 223 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 NIFKP8-201ENST00000560500 874 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AL357094.1-201ENST00000603845 844 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AC087783.2-201ENST00000605070 562 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AL627230.1-201ENST00000613077 211 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AC079395.3-201ENST00000615161 484 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AL591926.8-201ENST00000616876 211 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AC011330.2-201ENST00000621680 635 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AC053481.2-202ENST00000582394 1500 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 AC046144.1-201ENST00000478559 1853 ntBASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CHMP4CQ96CF2 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 HSPA8P18-201ENST00000439846 1928 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AL109941.1-201ENST00000401925 229 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 RN7SKP114-201ENST00000410327 279 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AC013429.2-201ENST00000418798 781 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AL513175.2-201ENST00000422071 443 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 RAC1P8-201ENST00000427086 527 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 RPS27P18-201ENST00000431701 247 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 RPS7P5-201ENST00000441482 581 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AL589765.3-201ENST00000446084 462 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AC112492.1-201ENST00000449607 712 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AC091685.2-201ENST00000454924 864 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 BX248409.1-201ENST00000455497 255 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AC005229.2-201ENST00000456995 399 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms