Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC074029.4-201ENST00000624796 1859 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 XPOTP1-201ENST00000443317 2398 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 RN7SKP104-201ENST00000362605 328 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 RNA5SP391-201ENST00000363456 119 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 RNA5SP455-201ENST00000365190 119 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 RNU6-207P-201ENST00000384137 107 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 MIR143-201ENST00000385300 106 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 ATG4AP1-201ENST00000416893 538 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 RPS12P5-201ENST00000423449 371 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 RPL21P110-201ENST00000433345 446 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AL451139.1-201ENST00000434718 346 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AL137845.2-201ENST00000444292 988 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 MTND1P33-201ENST00000446251 917 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AC005008.1-201ENST00000456151 612 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 DEFB109F-201ENST00000491870 277 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 MRPS33P2-201ENST00000507850 322 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 STMN1P2-201ENST00000508435 439 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AC110792.2-201ENST00000510278 224 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 RN7SKP96-201ENST00000516948 297 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 GSTP1P1-201ENST00000548078 319 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 OR1F2P-201ENST00000570470 933 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AP000919.1-202ENST00000581139 1264 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AC010424.2-201ENST00000607594 443 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 SNX18P1Y-201ENST00000616231 511 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AL133243.3-201ENST00000617415 3004 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AC253576.2-201ENST00000618815 580 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 AC005086.4-201ENST00000623065 213 ntBASIC4.59□□□□□ -1.67
VPS33AQ96AX1 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS33AQ96AX1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.59□□□□□ -1.68
VPS33AQ96AX1 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 MTND4P26-201ENST00000415971 1359 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 MIR323A-201ENST00000362199 86 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 GCNT6-201ENST00000379591 934 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AL355615.1-201ENST00000406187 641 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 VN1R37P-201ENST00000419096 748 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AL929288.2-201ENST00000446368 407 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 GXYLT1P1-201ENST00000446657 490 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 COPS8P2-201ENST00000473228 627 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 OR2AO1P-201ENST00000476497 403 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 BX284632.1-201ENST00000478218 541 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AC015724.1-201ENST00000478577 156 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 RPL7P51-201ENST00000490532 749 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AC104971.1-201ENST00000495117 578 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AC072052.1-201ENST00000496556 306 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 RPL7L1P13-201ENST00000511702 739 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 PRELID3BP4-201ENST00000515476 571 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AC010476.1-201ENST00000519111 851 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 ATP5J2P6-201ENST00000565203 266 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AC023824.3-201ENST00000569003 562 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms