Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC4Q92889 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC4Q92889 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC4Q92889 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.95□□□□□ -1.46
ERCC4Q92889 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC4Q92889 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.95□□□□□ -1.46
ERCC4Q92889 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC4Q92889 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC4Q92889 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC4Q92889 MTCO1P6-201ENST00000481192 1384 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 CASC19-221ENST00000641309 1382 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ERCC4Q92889 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC4Q92889 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC4Q92889 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC4Q92889 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC4Q92889 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.94□□□□□ -1.46
ERCC4Q92889 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.94□□□□□ -1.46
ERCC4Q92889 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.94□□□□□ -1.46
ERCC4Q92889 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AL391994.1-201ENST00000254724 282 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC4Q92889 RNU1-19P-201ENST00000363306 165 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 RNU4-2-201ENST00000365668 141 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.94□□□□□ -1.46
ERCC4Q92889 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC4Q92889 MIR589-201ENST00000385238 99 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 SNORA48.4-201ENST00000391089 134 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AL121978.1-201ENST00000402778 359 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC4Q92889 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC4Q92889 BMS1P17-202ENST00000416720 316 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC4Q92889 RPL34P3-201ENST00000421454 338 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC4Q92889 DPY19L1P2-201ENST00000426647 915 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 RPL23AP4-201ENST00000427757 463 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.94□□□□□ -1.46
ERCC4Q92889 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.94□□□□□ -1.46
ERCC4Q92889 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AC012075.1-201ENST00000436549 580 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.94□□□□□ -1.46
ERCC4Q92889 HMGN1P36-201ENST00000446623 298 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
ERCC4Q92889 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC4Q92889 RPL21P134-201ENST00000453468 483 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 RN7SL515P-201ENST00000463999 297 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
ERCC4Q92889 RPL30P6-201ENST00000475925 342 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 RN7SL273P-201ENST00000481561 299 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.94□□□□□ -1.46
ERCC4Q92889 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AC021146.8-201ENST00000507455 733 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC4Q92889 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AC023632.1-201ENST00000518463 375 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 RPL12P22-201ENST00000519073 490 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC4Q92889 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AC044913.1-201ENST00000557200 430 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC4Q92889 ISCA1P3-201ENST00000577104 373 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 MIR3915-201ENST00000578518 97 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AL162431.4-201ENST00000604674 411 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC4Q92889 AC126175.1-201ENST00000617041 758 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC4Q92889 AL359757.1-201ENST00000623176 255 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC4Q92889 U6.107-201ENST00000637108 79 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC4Q92889 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC4Q92889 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
ERCC4Q92889 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ERCC4Q92889 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC4Q92889 KARSP3-201ENST00000571212 1504 ntBASIC5.94□□□□□ -1.46
ERCC4Q92889 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ERCC4Q92889 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ERCC4Q92889 GTF2H2B-203ENST00000508065 1432 ntBASIC5.93□□□□□ -1.46
ERCC4Q92889 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ERCC4Q92889 UGT2B26P-201ENST00000508672 1613 ntBASIC5.93□□□□□ -1.46
ERCC4Q92889 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
ERCC4Q92889 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ERCC4Q92889 OR56B2P-201ENST00000317102 954 ntBASIC5.93□□□□□ -1.46
ERCC4Q92889 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ERCC4Q92889 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms