Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 SALL4P2-201ENST00000423288 2910 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 RNU6-1339P-201ENST00000363574 91 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 RPL21P43-201ENST00000425440 472 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 HMGB1P45-201ENST00000435986 653 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 RPL12P18-201ENST00000437175 325 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AC009263.1-201ENST00000441193 1239 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AC118469.1-201ENST00000442943 488 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 RPS26P30-201ENST00000443431 335 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 MRPL42P4-201ENST00000453267 443 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 RPL7P48-201ENST00000461513 746 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 RN7SL799P-201ENST00000475891 298 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AC108734.3-201ENST00000481241 1165 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AC090686.1-201ENST00000481577 749 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AC104971.1-201ENST00000495117 578 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AC111000.2-201ENST00000507775 550 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 ENPP7P9-201ENST00000514456 627 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AP002812.4-201ENST00000532139 286 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 BNIP3P1-201ENST00000547295 580 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AC084824.1-201ENST00000550917 1005 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AC135628.1-201ENST00000568867 534 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 EIF1P6-201ENST00000600054 334 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AL354976.1-201ENST00000613843 387 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AC079248.2-201ENST00000623779 326 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 ELL2P3-201ENST00000457883 1602 ntBASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATG4AQ8WYN0 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AL445523.1-201ENST00000451184 1362 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 SGO1P2-201ENST00000429458 1589 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AP005901.5-201ENST00000545779 1796 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 RNU6-707P-201ENST00000364647 95 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AC104297.1-201ENST00000393779 870 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 ATP5F1P3-201ENST00000397213 657 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 DUTP5-201ENST00000406790 469 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 RN7SKP126-201ENST00000411143 300 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AC234781.2-201ENST00000426370 994 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 CFL1P1-202ENST00000432948 411 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 GTF2IP7-202ENST00000436677 309 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 EEF1B2P5-201ENST00000444820 548 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 MTCO2P7-201ENST00000446518 666 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 RPL31P44-201ENST00000447680 377 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 TCEA1P1-201ENST00000449716 880 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 DNAJC19P8-201ENST00000452887 259 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AC073387.1-201ENST00000453261 709 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AC011225.1-201ENST00000457751 369 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 RPL31P3-201ENST00000458430 332 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 RNU7-125P-201ENST00000458760 62 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AC108693.1-201ENST00000496068 432 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 XKRY-201ENST00000510392 1100 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AC093755.1-201ENST00000512950 1023 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 RNA5SP249-201ENST00000516127 99 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AC027026.1-201ENST00000532323 742 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms