Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC010469.1-201ENST00000463864 576 ntBASIC2.78□□□□□ -1.97
ALMS1Q8TCU4 RPS29P2-201ENST00000479278 136 ntBASIC2.78□□□□□ -1.97
ALMS1Q8TCU4 AP000563.1-201ENST00000490865 758 ntBASIC2.78□□□□□ -1.97
ALMS1Q8TCU4 SNORA70.24-201ENST00000517233 118 ntBASIC2.78□□□□□ -1.97
ALMS1Q8TCU4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC2.78□□□□□ -1.97
ALMS1Q8TCU4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.78□□□□□ -1.97
ALMS1Q8TCU4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC2.78□□□□□ -1.97
ALMS1Q8TCU4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
ALMS1Q8TCU4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
ALMS1Q8TCU4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 SOD2P1-201ENST00000396543 562 ntBASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 OR2AH1P-201ENST00000425717 928 ntBASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 RPS4XP10-201ENST00000465034 731 ntBASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 AC073530.2-201ENST00000623987 261 ntBASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 RPL23AP46-201ENST00000438548 490 ntBASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 RPL7P9-201ENST00000468715 747 ntBASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 RN7SL812P-201ENST00000493791 279 ntBASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 DPRXP4-201ENST00000578053 568 ntBASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 AL358472.1-201ENST00000431295 329 ntBASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 AL451050.1-201ENST00000450126 415 ntBASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 BTG4P1-201ENST00000510421 183 ntBASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 RNA5SP497-201ENST00000516081 97 ntBASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 AC130352.1-201ENST00000602979 661 ntBASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
ALMS1Q8TCU4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 IL6STP1-201ENST00000346911 1020 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 AP002360.3-201ENST00000607673 710 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 LINC00561-201ENST00000565815 2738 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 AL513548.1-201ENST00000562904 1724 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 AC104849.1-201ENST00000462623 405 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 RPS29P19-201ENST00000479709 171 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 AC138938.1-201ENST00000515431 782 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 PRO1804-201ENST00000623780 2050 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 NXPH1-205ENST00000602349 1953 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 AC104623.2-202ENST00000623477 4002 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 SETP15-201ENST00000412724 337 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 OR6C64P-201ENST00000419708 825 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 TCEA1P2-201ENST00000420496 906 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 AC017083.1-201ENST00000428093 483 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 RPS6P2-201ENST00000454208 705 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 OSBPL9P2-201ENST00000526582 1228 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 GTF2IP8-201ENST00000560687 584 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 NPM1P47-201ENST00000560843 856 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 AC015726.1-201ENST00000602353 681 ntBASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC2.76□□□□□ -1.97
ALMS1Q8TCU4 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms