Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MIR548Y-201ENST00000582739 110 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 BNIP3P32-201ENST00000600015 554 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC008536.1-201ENST00000602872 669 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC010201.1-201ENST00000605051 540 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC007546.2-201ENST00000623996 360 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 MIR1910-201ENST00000636955 80 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC108467.2-201ENST00000617640 1597 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC068254.2-201ENST00000623938 3577 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC097504.1-201ENST00000515103 2415 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 RNA5SP307-201ENST00000362863 116 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 SNORA71.2-201ENST00000364941 134 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AP000534.2-201ENST00000412729 568 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 TRGV6-201ENST00000417928 299 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC004552.1-201ENST00000419089 348 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 RPL7P53-201ENST00000421245 739 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC079807.1-201ENST00000429993 481 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 CDY14P-201ENST00000431260 1014 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 CDY12P-201ENST00000440679 1015 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AL513321.1-201ENST00000441175 761 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 CDY13P-201ENST00000445813 1015 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC010733.1-201ENST00000451515 401 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 CDY23P-201ENST00000451661 1014 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 CABYRP1-201ENST00000465493 1045 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 RPS26P3-201ENST00000470205 348 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC104763.1-201ENST00000475274 360 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC090543.2-201ENST00000483963 348 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC004057.1-201ENST00000485827 348 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC072052.1-201ENST00000496556 306 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 GAPDHP56-201ENST00000506031 988 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 RN7SKP66-201ENST00000516681 231 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 IGKV2-18-201ENST00000522607 343 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AL049870.4-201ENST00000555741 486 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 RN7SL652P-201ENST00000577769 300 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 OR1AB1P-201ENST00000585564 761 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 BPIFA4P-203ENST00000603168 689 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC008638.3-201ENST00000603341 463 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC009163.6-201ENST00000612367 342 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC011472.4-201ENST00000615848 491 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AL713922.2-201ENST00000619384 716 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC015726.3-201ENST00000624501 418 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AP000843.1-201ENST00000624880 701 ntBASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC71LQ8N9Z2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 Y_RNA.110-201ENST00000363220 99 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 RN7SKP162-201ENST00000363605 345 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms