Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.15□□□□□ -1.43
VPS8Q8N3P4 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.15□□□□□ -1.43
VPS8Q8N3P4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.15□□□□□ -1.43
VPS8Q8N3P4 OR7A8P-201ENST00000595427 913 ntBASIC6.15□□□□□ -1.43
VPS8Q8N3P4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VPS8Q8N3P4 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.15□□□□□ -1.43
VPS8Q8N3P4 AP000542.2-201ENST00000623199 6179 ntBASIC6.15□□□□□ -1.43
VPS8Q8N3P4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC6.15□□□□□ -1.43
VPS8Q8N3P4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
VPS8Q8N3P4 AL442128.2-201ENST00000620246 1824 ntBASIC6.14□□□□□ -1.43
VPS8Q8N3P4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 AP002001.2-201ENST00000529025 1469 ntBASIC6.14□□□□□ -1.43
VPS8Q8N3P4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 RNA5SP306-201ENST00000411087 107 ntBASIC6.14□□□□□ -1.43
VPS8Q8N3P4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 OR4F13P-201ENST00000428478 931 ntBASIC6.14□□□□□ -1.43
VPS8Q8N3P4 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 RPL21P129-201ENST00000491732 478 ntBASIC6.14□□□□□ -1.43
VPS8Q8N3P4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 MIR5685-201ENST00000579080 79 ntBASIC6.14□□□□□ -1.43
VPS8Q8N3P4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 OR8B1P-202ENST00000641132 1178 ntBASIC6.14□□□□□ -1.43
VPS8Q8N3P4 AL596275.2-204ENST00000641628 552 ntBASIC6.14□□□□□ -1.43
VPS8Q8N3P4 AL596275.2-206ENST00000641957 626 ntBASIC6.14□□□□□ -1.43
VPS8Q8N3P4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS8Q8N3P4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS8Q8N3P4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC6.13□□□□□ -1.43
VPS8Q8N3P4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS8Q8N3P4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC6.13□□□□□ -1.43
VPS8Q8N3P4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS8Q8N3P4 RHOT1P2-201ENST00000366423 333 ntBASIC6.13□□□□□ -1.43
VPS8Q8N3P4 RPL7AP73-201ENST00000413490 353 ntBASIC6.13□□□□□ -1.43
VPS8Q8N3P4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.13□□□□□ -1.43
VPS8Q8N3P4 RANP8-201ENST00000444720 713 ntBASIC6.13□□□□□ -1.43
VPS8Q8N3P4 RN7SL323P-201ENST00000494712 295 ntBASIC6.13□□□□□ -1.43
VPS8Q8N3P4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS8Q8N3P4 AC008802.1-201ENST00000519121 791 ntBASIC6.13□□□□□ -1.43
VPS8Q8N3P4 GTF2IP22-201ENST00000554443 182 ntBASIC6.13□□□□□ -1.43
VPS8Q8N3P4 AC084759.1-201ENST00000561168 290 ntBASIC6.13□□□□□ -1.43
VPS8Q8N3P4 AC079684.1-201ENST00000621405 437 ntBASIC6.13□□□□□ -1.43
VPS8Q8N3P4 AC015722.2-201ENST00000622210 551 ntBASIC6.13□□□□□ -1.43
VPS8Q8N3P4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS8Q8N3P4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS8Q8N3P4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS8Q8N3P4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VPS8Q8N3P4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VPS8Q8N3P4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VPS8Q8N3P4 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VPS8Q8N3P4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VPS8Q8N3P4 OR4A15-201ENST00000314706 1035 ntBASIC6.12□□□□□ -1.43
VPS8Q8N3P4 AC007066.1-201ENST00000392902 381 ntBASIC6.12□□□□□ -1.43
VPS8Q8N3P4 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.12□□□□□ -1.43
VPS8Q8N3P4 AC044797.1-201ENST00000445744 679 ntBASIC6.12□□□□□ -1.43
VPS8Q8N3P4 MED28P5-201ENST00000528254 438 ntBASIC6.12□□□□□ -1.43
VPS8Q8N3P4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC6.12□□□□□ -1.43
VPS8Q8N3P4 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.12□□□□□ -1.43
VPS8Q8N3P4 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.12□□□□□ -1.43
VPS8Q8N3P4 AC245389.1-201ENST00000605141 529 ntBASIC6.12□□□□□ -1.43
VPS8Q8N3P4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
VPS8Q8N3P4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VPS8Q8N3P4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 MIR513A2-201ENST00000385249 127 ntBASIC6.11□□□□□ -1.43
VPS8Q8N3P4 SOD2P1-201ENST00000396543 562 ntBASIC6.11□□□□□ -1.43
VPS8Q8N3P4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 AL389915.1-201ENST00000422463 466 ntBASIC6.11□□□□□ -1.43
VPS8Q8N3P4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 VN1R25P-201ENST00000443385 738 ntBASIC6.11□□□□□ -1.43
VPS8Q8N3P4 NOTCH2P1-201ENST00000443481 624 ntBASIC6.11□□□□□ -1.43
VPS8Q8N3P4 VN1R40P-201ENST00000455196 941 ntBASIC6.11□□□□□ -1.43
VPS8Q8N3P4 AC091153.1-201ENST00000466297 402 ntBASIC6.11□□□□□ -1.43
VPS8Q8N3P4 SAP18P1-201ENST00000512058 390 ntBASIC6.11□□□□□ -1.43
VPS8Q8N3P4 RNA5SP154-201ENST00000516193 111 ntBASIC6.11□□□□□ -1.43
VPS8Q8N3P4 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 PTS-202ENST00000524931 696 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 AC005255.1-201ENST00000593748 216 ntBASIC6.11□□□□□ -1.43
VPS8Q8N3P4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 AP000255.1-201ENST00000610276 676 ntBASIC6.11□□□□□ -1.43
VPS8Q8N3P4 AC245389.2-201ENST00000616023 576 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms