Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TPRKBP2-201ENST00000565969 475 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AC010547.6-201ENST00000571789 193 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 SEPT7P9-203ENST00000604116 343 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AP004247.3-201ENST00000608682 624 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AC016769.4-201ENST00000616893 535 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 AC000095.2-202ENST00000637415 154 ntBASIC5.65□□□□□ -1.5
TRIM48Q8IWZ4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM48Q8IWZ4 AC107982.1-201ENST00000507171 1300 ntBASIC5.65□□□□□ -1.51
TRIM48Q8IWZ4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
TRIM48Q8IWZ4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
TRIM48Q8IWZ4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM48Q8IWZ4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM48Q8IWZ4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM48Q8IWZ4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM48Q8IWZ4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.65□□□□□ -1.51
TRIM48Q8IWZ4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM48Q8IWZ4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.65□□□□□ -1.51
TRIM48Q8IWZ4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM48Q8IWZ4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM48Q8IWZ4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 OR4G2P-201ENST00000328113 903 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 RNU6-501P-201ENST00000364072 100 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AC087752.1-201ENST00000391360 558 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 IPMKP1-201ENST00000425988 855 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 UBE2V1P8-201ENST00000437166 265 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 RPS7P5-201ENST00000441482 581 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 EEF1E1P1-201ENST00000446998 430 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 RN7SL717P-201ENST00000478343 297 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 RNA5SP135-201ENST00000517019 125 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 HMGB1P42-201ENST00000532126 553 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AC090424.1-201ENST00000535243 736 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AC008126.1-201ENST00000549019 480 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 PCMTD1P2-201ENST00000565017 355 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AC098614.4-201ENST00000607601 462 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AC090970.3-201ENST00000612566 866 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 MIR6862-1-201ENST00000613016 70 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 MIR6862-2-201ENST00000614755 70 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 MIR6729-201ENST00000618194 65 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 ATE1-AS1-202ENST00000636460 506 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 OR52B5P-202ENST00000641118 1110 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 OR5H6-203ENST00000642105 978 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AC114786.1-201ENST00000512892 1415 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 AC005261.2-201ENST00000593427 4258 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 OR13C1P-202ENST00000641378 2919 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TRIM48Q8IWZ4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC109446.4-201ENST00000623235 2755 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms