Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 HNRNPKP5-201ENST00000515300 253 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 FABP5P5-201ENST00000515537 406 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 BX510359.5-201ENST00000515651 304 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 RN7SKP141-201ENST00000516167 338 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC013701.1-201ENST00000522657 465 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 ADI1P3-201ENST00000549509 470 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC087883.1-201ENST00000551882 391 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 HIGD1AP17-201ENST00000554576 276 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC127381.1-201ENST00000555979 939 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 ZNF519P3-201ENST00000557158 1032 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC019322.1-201ENST00000571869 389 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 MIR3176-201ENST00000582210 90 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 SLC25A36P1-201ENST00000590111 465 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 IMMP1LP3-201ENST00000604197 224 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC090186.1-201ENST00000605991 572 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC091946.2-201ENST00000606105 291 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC007684.1-201ENST00000609671 477 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC099654.10-201ENST00000640395 161 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 TTC39DP-201ENST00000416781 1688 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 MTCO1P18-201ENST00000455518 1419 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 AL137100.1-201ENST00000556703 1620 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
VRK3Q8IV63 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VRK3Q8IV63 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
VRK3Q8IV63 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VRK3Q8IV63 AC000367.1-201ENST00000452711 1766 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 TCP11X1-202ENST00000622971 1372 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 MTCO1P11-201ENST00000429111 1528 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VRK3Q8IV63 SNORA51.1-201ENST00000363243 140 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 MIR105-1-201ENST00000385222 81 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 HSPA8P15-201ENST00000401676 786 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 HMGB3P31-201ENST00000413333 595 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 Z99497.1-201ENST00000421282 135 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 IPMKP1-201ENST00000425988 855 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 ZNF863P-201ENST00000426746 417 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 FAM96AP1-201ENST00000430879 482 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 AL590103.1-201ENST00000434488 307 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 CNOT7P2-201ENST00000441051 832 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 RHEBP2-201ENST00000450289 600 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 ELOCP23-201ENST00000452014 332 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 TPT1P7-201ENST00000458300 517 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 RNU7-140P-201ENST00000459546 60 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 RPL7P6-201ENST00000480903 738 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 AC109486.1-201ENST00000486833 374 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VRK3Q8IV63 AC025459.1-201ENST00000504072 156 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 AC024558.1-201ENST00000505008 528 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 IMPA1P1-201ENST00000510718 842 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 SNORA31.13-201ENST00000516624 135 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 AC012414.6-201ENST00000568241 401 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 ROCK1P1-201ENST00000573767 549 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 RN7SL290P-201ENST00000578661 300 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 AC006539.2-201ENST00000601729 572 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 AL162431.4-201ENST00000604674 411 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 NDUFA8P1-201ENST00000605525 367 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 AC008498.1-201ENST00000613012 531 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms