Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
SHFQ7M4L6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHFQ7M4L6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHFQ7M4L6 PANDAR-201ENST00000629595 1506 ntBASIC4.51□□□□□ -1.69
SHFQ7M4L6 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHFQ7M4L6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SHFQ7M4L6 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHFQ7M4L6 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHFQ7M4L6 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC006042.3-201ENST00000454684 1469 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHFQ7M4L6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHFQ7M4L6 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHFQ7M4L6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHFQ7M4L6 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHFQ7M4L6 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 snoZ40.1-201ENST00000364540 72 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 OR1L1-202ENST00000373686 1083 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 RNU6-413P-201ENST00000384115 107 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 AL049545.1-201ENST00000401856 572 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 FCF1P5-201ENST00000406490 482 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 QRSL1P2-201ENST00000418582 964 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC048351.1-201ENST00000420064 602 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 GAPDHP49-201ENST00000421421 961 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 RPS6P15-201ENST00000431996 751 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 TMX2P1-201ENST00000436507 708 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 CBX1P4-201ENST00000439415 457 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC073587.1-201ENST00000447093 876 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 MRPL42P4-201ENST00000453267 443 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 PRDX3P4-201ENST00000470828 747 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHFQ7M4L6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC084024.2-201ENST00000503480 791 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC023632.1-201ENST00000518463 375 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 BNIP3P24-201ENST00000593398 557 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC021171.1-201ENST00000603137 706 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 AL592148.2-201ENST00000612210 372 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 MIR8069-1-201ENST00000616627 86 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC091304.6-201ENST00000619761 202 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 MIR8069-2-201ENST00000621412 86 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC074140.1-201ENST00000621617 208 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC079416.3-201ENST00000624479 549 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC009039.2-201ENST00000624524 529 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC017037.3-201ENST00000625016 472 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC092608.3-201ENST00000625017 386 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 MFSD8-245ENST00000641743 948 ntBASIC4.5□□□□□ -1.69
SHFQ7M4L6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHFQ7M4L6 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SHFQ7M4L6 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHFQ7M4L6 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.49□□□□□ -1.69
SHFQ7M4L6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHFQ7M4L6 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHFQ7M4L6 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.49□□□□□ -1.69
SHFQ7M4L6 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SHFQ7M4L6 CASC19-206ENST00000641028 1430 ntBASIC4.49□□□□□ -1.69
SHFQ7M4L6 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SHFQ7M4L6 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SHFQ7M4L6 RNU6-1214P-201ENST00000363650 109 ntBASIC4.49□□□□□ -1.69
SHFQ7M4L6 RNU6-707P-201ENST00000364647 95 ntBASIC4.49□□□□□ -1.69
SHFQ7M4L6 SNORA70.10-201ENST00000384515 134 ntBASIC4.49□□□□□ -1.69
SHFQ7M4L6 MIR143-201ENST00000385300 106 ntBASIC4.49□□□□□ -1.69
SHFQ7M4L6 AL590084.1-201ENST00000407885 387 ntBASIC4.49□□□□□ -1.69
SHFQ7M4L6 RN7SKP59-201ENST00000410520 314 ntBASIC4.49□□□□□ -1.69
SHFQ7M4L6 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.49□□□□□ -1.69
SHFQ7M4L6 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.49□□□□□ -1.69
SHFQ7M4L6 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.49□□□□□ -1.69
SHFQ7M4L6 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.49□□□□□ -1.69
SHFQ7M4L6 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms