Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 AC012254.4-201ENST00000588843 273 ntBASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 AC008536.1-201ENST00000602872 669 ntBASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 FO393422.1-201ENST00000603908 708 ntBASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 AL445493.3-201ENST00000619568 477 ntBASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 AC067931.1-201ENST00000624190 671 ntBASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 NSRP1P1-201ENST00000444067 1693 ntBASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.71□□□□□ -1.82
KCNIP4Q6PIL6 AC012020.1-201ENST00000624541 1728 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC011266.1-201ENST00000624119 3569 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 OR56B2P-201ENST00000317102 954 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 RNU6-1339P-201ENST00000363574 91 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 RNA5SP455-201ENST00000365190 119 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 OR52E6-202ENST00000379946 954 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 BPHL-201ENST00000380368 797 ntTSL 5 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 SNORA16A-201ENST00000384342 137 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 SNORA51.12-201ENST00000384448 134 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AL603766.1-201ENST00000407763 664 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC092832.1-201ENST00000422934 400 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 Z74021.1-201ENST00000423610 407 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 OR4F13P-201ENST00000428478 931 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AL391987.1-201ENST00000441025 200 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC133473.1-201ENST00000455173 299 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 RPS17P2-201ENST00000461663 408 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 OR2AO1P-201ENST00000476497 403 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 PPM1AP1-201ENST00000502740 1135 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 MTND3P24-201ENST00000506306 329 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC018797.3-201ENST00000513388 1241 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC007424.1-203ENST00000554613 687 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 RPL7P50-201ENST00000600588 727 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AL139395.1-201ENST00000603662 160 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC008966.2-201ENST00000606157 453 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC020634.1-201ENST00000608701 549 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AL049794.2-201ENST00000616301 365 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AC073569.3-201ENST00000619055 682 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 FAM157B-203ENST00000639350 358 ntBASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
KCNIP4Q6PIL6 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KCNIP4Q6PIL6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
KCNIP4Q6PIL6 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
KCNIP4Q6PIL6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.69□□□□□ -1.82
KCNIP4Q6PIL6 OR13C1P-202ENST00000641378 2919 ntBASIC3.69□□□□□ -1.82
KCNIP4Q6PIL6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
KCNIP4Q6PIL6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.69□□□□□ -1.82
KCNIP4Q6PIL6 AC083899.2-201ENST00000423285 1376 ntBASIC3.69□□□□□ -1.82
KCNIP4Q6PIL6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KCNIP4Q6PIL6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
KCNIP4Q6PIL6 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KCNIP4Q6PIL6 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KCNIP4Q6PIL6 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
KCNIP4Q6PIL6 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms