Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 MIR4789-201ENST00000577469 82 ntBASIC4.6□□□□□ -1.67
CDK3Q00526 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.6□□□□□ -1.67
CDK3Q00526 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK3Q00526 AL133338.2-201ENST00000604292 736 ntBASIC4.6□□□□□ -1.67
CDK3Q00526 AC096586.1-201ENST00000610267 561 ntBASIC4.6□□□□□ -1.67
CDK3Q00526 U6.48-201ENST00000618523 106 ntBASIC4.6□□□□□ -1.67
CDK3Q00526 AL512427.1-201ENST00000618593 349 ntBASIC4.6□□□□□ -1.67
CDK3Q00526 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK3Q00526 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDK3Q00526 AC096656.1-201ENST00000623826 1364 ntBASIC4.6□□□□□ -1.67
CDK3Q00526 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDK3Q00526 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDK3Q00526 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CDK3Q00526 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDK3Q00526 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDK3Q00526 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDK3Q00526 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDK3Q00526 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDK3Q00526 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.6□□□□□ -1.67
CDK3Q00526 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK3Q00526 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CDK3Q00526 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDK3Q00526 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK3Q00526 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDK3Q00526 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDK3Q00526 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDK3Q00526 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDK3Q00526 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDK3Q00526 RNU6-543P-201ENST00000362576 108 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 RNU5B-4P-201ENST00000363508 111 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK3Q00526 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDK3Q00526 RPL23AP59-201ENST00000399415 461 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 UBE2V1P9-201ENST00000414760 368 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 AC241520.1-201ENST00000422654 1099 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 DNAJC19P7-201ENST00000428811 344 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 CNOT7P1-201ENST00000429006 852 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK3Q00526 RPS24P8-201ENST00000431490 402 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 RPS7P2-201ENST00000435134 607 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 FABP5P3-201ENST00000437960 408 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 HSFY3P-201ENST00000444242 1191 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK3Q00526 AL162591.2-201ENST00000449634 317 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 GTF2IP12-201ENST00000456547 356 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 RNU6-1218P-201ENST00000458990 108 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK3Q00526 AC098799.3-201ENST00000506095 438 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK3Q00526 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDK3Q00526 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.59□□□□□ -1.67
CDK3Q00526 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK3Q00526 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK3Q00526 YWHAZP1-201ENST00000556286 722 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 ATP5F1P7-201ENST00000567330 760 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 AC209154.1-201ENST00000582156 337 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 AC125494.3-201ENST00000602759 455 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 AC093765.1-201ENST00000603758 881 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 AC112503.1-201ENST00000608436 391 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK3Q00526 AP000240.1-201ENST00000609910 452 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 AC104763.3-201ENST00000613765 618 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 AC108467.2-201ENST00000617640 1597 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK3Q00526 MIR7641-1-201ENST00000627518 61 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK3Q00526 AC099654.8-201ENST00000637757 681 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 AL445984.1-201ENST00000637834 659 ntBASIC4.59□□□□□ -1.67
CDK3Q00526 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDK3Q00526 OR14L1P-202ENST00000641545 3009 ntBASIC4.59□□□□□ -1.68
CDK3Q00526 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CDK3Q00526 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK3Q00526 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDK3Q00526 SEC63P2-201ENST00000503863 1939 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK3Q00526 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK3Q00526 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CDK3Q00526 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK3Q00526 HSPD1P14-201ENST00000432666 1618 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK3Q00526 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK3Q00526 KARSP3-201ENST00000571212 1504 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK3Q00526 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK3Q00526 AL592148.3-201ENST00000608771 2646 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDK3Q00526 ENSAP3-201ENST00000312710 333 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 RNU1-32P-201ENST00000363937 159 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK3Q00526 MIR129-1-201ENST00000384972 72 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDK3Q00526 MIR1303-201ENST00000408625 86 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 AC096533.1-201ENST00000411645 353 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK3Q00526 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK3Q00526 UQCRBP1-201ENST00000421129 336 ntBASIC4.58□□□□□ -1.68
CDK3Q00526 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK3Q00526 RPL23AP1-201ENST00000428990 471 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms