Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC114814.2-201ENST00000419195 485 ntBASIC3.49□□□□□ -1.85
LSM3P62310 AC092570.3-201ENST00000420113 693 ntBASIC3.49□□□□□ -1.85
LSM3P62310 HMGB1P32-201ENST00000425971 565 ntBASIC3.49□□□□□ -1.85
LSM3P62310 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.49□□□□□ -1.85
LSM3P62310 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.49□□□□□ -1.85
LSM3P62310 TXNP1-201ENST00000441872 371 ntBASIC3.49□□□□□ -1.85
LSM3P62310 RPS4XP4-201ENST00000443195 763 ntBASIC3.49□□□□□ -1.85
LSM3P62310 RANP8-201ENST00000444720 713 ntBASIC3.49□□□□□ -1.85
LSM3P62310 EXTL2P1-201ENST00000446218 416 ntBASIC3.49□□□□□ -1.85
LSM3P62310 PHBP16-201ENST00000446318 950 ntBASIC3.49□□□□□ -1.85
LSM3P62310 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.49□□□□□ -1.85
LSM3P62310 AC092324.1-201ENST00000468671 324 ntBASIC3.49□□□□□ -1.85
LSM3P62310 AC083982.1-201ENST00000485679 344 ntBASIC3.49□□□□□ -1.85
LSM3P62310 RNA5SP49-201ENST00000516450 115 ntBASIC3.49□□□□□ -1.85
LSM3P62310 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC3.49□□□□□ -1.85
LSM3P62310 OR5AP1P-201ENST00000529730 940 ntBASIC3.49□□□□□ -1.85
LSM3P62310 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM3P62310 CD24P2-201ENST00000565486 219 ntBASIC3.49□□□□□ -1.85
LSM3P62310 UBE2FP2-201ENST00000566646 462 ntBASIC3.49□□□□□ -1.85
LSM3P62310 AC010547.7-201ENST00000570323 333 ntBASIC3.49□□□□□ -1.85
LSM3P62310 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.49□□□□□ -1.85
LSM3P62310 MIR5684-201ENST00000585074 65 ntBASIC3.49□□□□□ -1.85
LSM3P62310 AL512624.1-201ENST00000613638 469 ntBASIC3.49□□□□□ -1.85
LSM3P62310 AC022960.2-201ENST00000616300 666 ntBASIC3.49□□□□□ -1.85
LSM3P62310 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM3P62310 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.49□□□□□ -1.85
LSM3P62310 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM3P62310 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LSM3P62310 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LSM3P62310 AC093775.1-201ENST00000624154 1868 ntBASIC3.49□□□□□ -1.85
LSM3P62310 AL590763.1-201ENST00000398297 1545 ntBASIC3.49□□□□□ -1.85
LSM3P62310 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
LSM3P62310 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LSM3P62310 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
LSM3P62310 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
LSM3P62310 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LSM3P62310 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
LSM3P62310 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LSM3P62310 SNORD113.2-201ENST00000364166 89 ntBASIC3.48□□□□□ -1.85
LSM3P62310 AL645927.1-201ENST00000396783 406 ntBASIC3.48□□□□□ -1.85
LSM3P62310 RN7SKP285-201ENST00000410137 318 ntBASIC3.48□□□□□ -1.85
LSM3P62310 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.48□□□□□ -1.85
LSM3P62310 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.48□□□□□ -1.85
LSM3P62310 RPS26P47-201ENST00000427219 348 ntBASIC3.48□□□□□ -1.85
LSM3P62310 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LSM3P62310 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.48□□□□□ -1.85
LSM3P62310 RPL36AP15-201ENST00000444514 266 ntBASIC3.48□□□□□ -1.85
LSM3P62310 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.48□□□□□ -1.85
LSM3P62310 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.48□□□□□ -1.85
LSM3P62310 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM3P62310 AL162388.1-201ENST00000450912 352 ntBASIC3.48□□□□□ -1.85
LSM3P62310 MRPS31P2-201ENST00000451581 518 ntBASIC3.48□□□□□ -1.85
LSM3P62310 NANOGP10-201ENST00000453325 895 ntBASIC3.48□□□□□ -1.85
LSM3P62310 AC098824.1-201ENST00000453565 980 ntBASIC3.48□□□□□ -1.85
LSM3P62310 AC005229.2-201ENST00000456995 399 ntBASIC3.48□□□□□ -1.85
LSM3P62310 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC3.48□□□□□ -1.85
LSM3P62310 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LSM3P62310 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM3P62310 OR7H2P-201ENST00000513483 306 ntBASIC3.48□□□□□ -1.85
LSM3P62310 RNA5SP228-201ENST00000516232 133 ntBASIC3.48□□□□□ -1.85
LSM3P62310 IGKV1-32-201ENST00000519290 311 ntBASIC3.48□□□□□ -1.85
LSM3P62310 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM3P62310 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM3P62310 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM3P62310 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
LSM3P62310 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM3P62310 AC090515.3-201ENST00000560431 315 ntBASIC3.48□□□□□ -1.85
LSM3P62310 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM3P62310 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3.48□□□□□ -1.85
LSM3P62310 RN7SL690P-201ENST00000582087 240 ntBASIC3.48□□□□□ -1.85
LSM3P62310 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.48□□□□□ -1.85
LSM3P62310 AC008782.1-201ENST00000603386 430 ntBASIC3.48□□□□□ -1.85
LSM3P62310 AL365503.1-201ENST00000605247 905 ntBASIC3.48□□□□□ -1.85
LSM3P62310 AP003497.2-201ENST00000624220 967 ntBASIC3.48□□□□□ -1.85
LSM3P62310 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.48□□□□□ -1.85
LSM3P62310 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.48□□□□□ -1.85
LSM3P62310 ATE1-AS1-202ENST00000636460 506 ntBASIC3.48□□□□□ -1.85
LSM3P62310 CASC19-222ENST00000641321 1173 ntBASIC3.48□□□□□ -1.85
LSM3P62310 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LSM3P62310 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LSM3P62310 SPATA2P1-201ENST00000431223 2055 ntBASIC3.48□□□□□ -1.85
LSM3P62310 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LSM3P62310 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.47□□□□□ -1.85
LSM3P62310 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
LSM3P62310 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.47□□□□□ -1.85
LSM3P62310 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LSM3P62310 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LSM3P62310 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM3P62310 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LSM3P62310 AC103591.2-201ENST00000265259 766 ntBASIC3.47□□□□□ -1.85
LSM3P62310 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LSM3P62310 SNORA57.3-201ENST00000411095 141 ntBASIC3.47□□□□□ -1.85
LSM3P62310 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.47□□□□□ -1.85
LSM3P62310 P2RY10P2-201ENST00000416730 913 ntBASIC3.47□□□□□ -1.85
LSM3P62310 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.47□□□□□ -1.85
LSM3P62310 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LSM3P62310 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM3P62310 MOB1AP1-201ENST00000430903 535 ntBASIC3.47□□□□□ -1.85
LSM3P62310 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM3P62310 AC011998.1-201ENST00000433403 117 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms