Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN6P56747 AC099669.2-201ENST00000616549 437 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 AC015908.5-201ENST00000623289 343 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 AC067931.1-201ENST00000624190 671 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 CDRT1-208ENST00000630868 794 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN6P56747 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CLDN6P56747 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN6P56747 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN6P56747 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CLDN6P56747 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CLDN6P56747 AC139769.1-204ENST00000472297 1931 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN6P56747 AC083843.3-201ENST00000623679 2186 ntBASIC4.19□□□□□ -1.74
CLDN6P56747 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN6P56747 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN6P56747 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN6P56747 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
CLDN6P56747 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN6P56747 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLDN6P56747 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN6P56747 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLDN6P56747 PTMAP2-201ENST00000397627 327 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 AL512430.2-201ENST00000406786 339 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 AL035696.2-201ENST00000407941 709 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.18□□□□□ -1.74
CLDN6P56747 RN7SKP159-201ENST00000410657 292 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 AL590806.1-201ENST00000415818 853 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN6P56747 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN6P56747 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN6P56747 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.18□□□□□ -1.74
CLDN6P56747 BTF3P10-201ENST00000433415 495 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 AL356276.2-201ENST00000435919 558 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 UBE2V1P3-201ENST00000439651 417 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN6P56747 AC114495.1-201ENST00000441274 436 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 SEPT7P6-201ENST00000469999 1143 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 ATP1B1P1-201ENST00000509767 915 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 RNU6-319P-201ENST00000516025 108 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN6P56747 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.18□□□□□ -1.74
CLDN6P56747 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN6P56747 AC053481.4-201ENST00000583164 216 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 AC079587.1-201ENST00000603846 277 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 AC012213.4-201ENST00000606457 354 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN6P56747 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN6P56747 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN6P56747 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN6P56747 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLDN6P56747 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN6P56747 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.18□□□□□ -1.74
CLDN6P56747 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN6P56747 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN6P56747 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN6P56747 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN6P56747 AC110792.3-201ENST00000595906 1614 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN6P56747 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
CLDN6P56747 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
CLDN6P56747 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN6P56747 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN6P56747 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CLDN6P56747 AC093719.1-202ENST00000392735 373 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CLDN6P56747 RN7SKP33-201ENST00000410942 340 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 RN7SKP247-201ENST00000411094 308 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN6P56747 UBE2V2P1-201ENST00000434717 398 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN6P56747 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN6P56747 RPL7P33-201ENST00000444159 742 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN6P56747 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN6P56747 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN6P56747 RPL35AP15-201ENST00000468042 339 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
CLDN6P56747 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.17□□□□□ -1.74
CLDN6P56747 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CLDN6P56747 FTH1P21-201ENST00000512179 511 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 TCP11X3P-202ENST00000514289 1254 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN6P56747 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN6P56747 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN6P56747 AC006116.5-201ENST00000591936 559 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN6P56747 AC090181.2-201ENST00000602975 672 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 AC007620.3-201ENST00000608131 497 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 AC234782.5-201ENST00000617723 324 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN6P56747 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.17□□□□□ -1.74
CLDN6P56747 AL672167.1-203ENST00000641299 2975 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN6P56747 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN6P56747 MAPK10-303ENST00000641324 3959 ntBASIC4.17□□□□□ -1.74
CLDN6P56747 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN6P56747 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms