Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 Y_RNA.372-201ENST00000365599 102 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.52□□□□□ -1.53
GFRA1P56159 Y_RNA.450-201ENST00000384198 113 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 RNU6-114P-201ENST00000384704 105 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
GFRA1P56159 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 GSTA9P-201ENST00000406231 611 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.52□□□□□ -1.53
GFRA1P56159 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.52□□□□□ -1.53
GFRA1P56159 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.52□□□□□ -1.53
GFRA1P56159 AC115283.1-201ENST00000427353 400 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 CLUHP1-201ENST00000435012 1190 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 MRPS21P3-201ENST00000436696 262 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 TUBB4BP6-201ENST00000437576 479 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 RPL7P11-201ENST00000437586 658 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 AL121601.2-201ENST00000438019 707 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 ATP5LP2-201ENST00000440646 311 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.52□□□□□ -1.53
GFRA1P56159 MTND6P13-201ENST00000443510 523 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 FTLP8-201ENST00000446770 267 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.52□□□□□ -1.53
GFRA1P56159 CFL1P4-201ENST00000451536 498 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.52□□□□□ -1.53
GFRA1P56159 HIGD1AP8-201ENST00000453927 274 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.52□□□□□ -1.53
GFRA1P56159 AC013267.1-201ENST00000458227 267 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.52□□□□□ -1.53
GFRA1P56159 AC098847.1-201ENST00000473094 348 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 AC092989.1-201ENST00000481235 277 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 TMEM251P1-201ENST00000503717 318 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
GFRA1P56159 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
GFRA1P56159 PTGES3P3-201ENST00000511479 482 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.52□□□□□ -1.53
GFRA1P56159 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.52□□□□□ -1.53
GFRA1P56159 ZNF705CP-201ENST00000530515 889 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.52□□□□□ -1.53
GFRA1P56159 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.52□□□□□ -1.53
GFRA1P56159 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.52□□□□□ -1.53
GFRA1P56159 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.52□□□□□ -1.53
GFRA1P56159 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.52□□□□□ -1.53
GFRA1P56159 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.52□□□□□ -1.53
GFRA1P56159 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.52□□□□□ -1.53
GFRA1P56159 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.52□□□□□ -1.53
GFRA1P56159 AL683813.2-201ENST00000605245 502 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 HSPE1P14-201ENST00000605812 302 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 AC104458.1-201ENST00000608243 463 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 U6.101-201ENST00000637707 76 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
GFRA1P56159 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
GFRA1P56159 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.52□□□□□ -1.53
GFRA1P56159 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.52□□□□□ -1.53
GFRA1P56159 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 AL355377.1-201ENST00000621125 1653 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 AOX3P-204ENST00000491025 2107 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA1P56159 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA1P56159 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA1P56159 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
GFRA1P56159 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA1P56159 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA1P56159 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GFRA1P56159 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
GFRA1P56159 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA1P56159 AC097504.1-201ENST00000515103 2415 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 SNORD8-201ENST00000363915 110 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA1P56159 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.51□□□□□ -1.53
GFRA1P56159 RNU6-769P-201ENST00000384407 104 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 RNU6-441P-201ENST00000384545 106 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 MIR649-201ENST00000384843 97 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 AC087752.1-201ENST00000391360 558 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 MIR1282-201ENST00000408865 101 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
GFRA1P56159 AL096829.1-201ENST00000413677 457 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.51□□□□□ -1.53
GFRA1P56159 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA1P56159 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.51□□□□□ -1.53
GFRA1P56159 AC009480.2-201ENST00000422916 432 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 MTCO2P19-201ENST00000427513 598 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.51□□□□□ -1.53
GFRA1P56159 TIMM9P3-201ENST00000428659 274 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.51□□□□□ -1.53
GFRA1P56159 MTND5P14-201ENST00000441481 1267 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.51□□□□□ -1.53
GFRA1P56159 AC112653.1-201ENST00000443851 386 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.51□□□□□ -1.53
GFRA1P56159 AC243772.1-201ENST00000451620 410 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
GFRA1P56159 AC073594.1-201ENST00000462065 364 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 RPL7P22-201ENST00000466005 733 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.51□□□□□ -1.53
GFRA1P56159 FAM92A1P2-202ENST00000504766 877 ntBASIC5.51□□□□□ -1.53
GFRA1P56159 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.51□□□□□ -1.53
GFRA1P56159 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms