Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.67□□□□□ -1.5
CLTCL1P53675 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.67□□□□□ -1.5
CLTCL1P53675 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLTCL1P53675 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLTCL1P53675 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CLTCL1P53675 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLTCL1P53675 SNORA9-201ENST00000384215 133 ntBASIC5.66□□□□□ -1.5
CLTCL1P53675 MIR199A2-201ENST00000385289 110 ntBASIC5.66□□□□□ -1.5
CLTCL1P53675 RNA5SP146-201ENST00000410743 123 ntBASIC5.66□□□□□ -1.5
CLTCL1P53675 CRYBB2P1-203ENST00000415709 538 ntBASIC5.66□□□□□ -1.5
CLTCL1P53675 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.66□□□□□ -1.5
CLTCL1P53675 AC005008.1-201ENST00000456151 612 ntBASIC5.66□□□□□ -1.5
CLTCL1P53675 UBE2CP3-201ENST00000502715 450 ntBASIC5.66□□□□□ -1.5
CLTCL1P53675 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.66□□□□□ -1.5
CLTCL1P53675 OR5M7P-201ENST00000526140 972 ntBASIC5.66□□□□□ -1.5
CLTCL1P53675 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.66□□□□□ -1.5
CLTCL1P53675 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.66□□□□□ -1.5
CLTCL1P53675 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.66□□□□□ -1.5
CLTCL1P53675 AC017100.2-201ENST00000584628 355 ntBASIC5.66□□□□□ -1.5
CLTCL1P53675 AC084757.4-201ENST00000616350 526 ntBASIC5.66□□□□□ -1.5
CLTCL1P53675 AC095038.2-201ENST00000621464 1070 ntBASIC5.66□□□□□ -1.5
CLTCL1P53675 AC015908.5-201ENST00000623289 343 ntBASIC5.66□□□□□ -1.5
CLTCL1P53675 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.66□□□□□ -1.5
CLTCL1P53675 DDX18P4-201ENST00000511690 1966 ntBASIC5.66□□□□□ -1.5
CLTCL1P53675 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLTCL1P53675 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLTCL1P53675 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CLTCL1P53675 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.66□□□□□ -1.5
CLTCL1P53675 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLTCL1P53675 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLTCL1P53675 AC233289.1-201ENST00000403700 508 ntBASIC5.66□□□□□ -1.5
CLTCL1P53675 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.66□□□□□ -1.5
CLTCL1P53675 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.66□□□□□ -1.5
CLTCL1P53675 AC006499.5-201ENST00000505037 514 ntBASIC5.66□□□□□ -1.5
CLTCL1P53675 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.66□□□□□ -1.5
CLTCL1P53675 CYCSP30-201ENST00000546447 172 ntBASIC5.66□□□□□ -1.5
CLTCL1P53675 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLTCL1P53675 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CLTCL1P53675 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLTCL1P53675 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CLTCL1P53675 AC005261.6-201ENST00000623072 1387 ntBASIC5.65□□□□□ -1.5
CLTCL1P53675 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLTCL1P53675 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLTCL1P53675 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.65□□□□□ -1.5
CLTCL1P53675 TCEA1P2-201ENST00000420496 906 ntBASIC5.65□□□□□ -1.51
CLTCL1P53675 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.65□□□□□ -1.51
CLTCL1P53675 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.65□□□□□ -1.51
CLTCL1P53675 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.65□□□□□ -1.51
CLTCL1P53675 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.65□□□□□ -1.51
CLTCL1P53675 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.65□□□□□ -1.51
CLTCL1P53675 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.65□□□□□ -1.51
CLTCL1P53675 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.65□□□□□ -1.51
CLTCL1P53675 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.65□□□□□ -1.51
CLTCL1P53675 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.65□□□□□ -1.51
CLTCL1P53675 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.65□□□□□ -1.51
CLTCL1P53675 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.65□□□□□ -1.51
CLTCL1P53675 AC233702.9-201ENST00000581528 203 ntBASIC5.65□□□□□ -1.51
CLTCL1P53675 AC079684.1-201ENST00000621405 437 ntBASIC5.65□□□□□ -1.51
CLTCL1P53675 AC124312.6-202ENST00000623624 418 ntBASIC5.65□□□□□ -1.51
CLTCL1P53675 AL079305.1-201ENST00000623159 3008 ntBASIC5.65□□□□□ -1.51
CLTCL1P53675 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
CLTCL1P53675 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CLTCL1P53675 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CLTCL1P53675 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLTCL1P53675 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLTCL1P53675 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CLTCL1P53675 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLTCL1P53675 AC024560.2-201ENST00000507981 1497 ntBASIC5.64□□□□□ -1.51
CLTCL1P53675 SNORA11.2-201ENST00000408318 127 ntBASIC5.64□□□□□ -1.51
CLTCL1P53675 DYNLL1P7-201ENST00000429273 258 ntBASIC5.64□□□□□ -1.51
CLTCL1P53675 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.64□□□□□ -1.51
CLTCL1P53675 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.64□□□□□ -1.51
CLTCL1P53675 AL133162.1-201ENST00000463228 453 ntBASIC5.64□□□□□ -1.51
CLTCL1P53675 AC008155.2-201ENST00000464337 397 ntBASIC5.64□□□□□ -1.51
CLTCL1P53675 DSTNP2-201ENST00000504533 515 ntBASIC5.64□□□□□ -1.51
CLTCL1P53675 RNU1-95P-201ENST00000516357 160 ntBASIC5.64□□□□□ -1.51
CLTCL1P53675 RNU1-128P-201ENST00000516704 160 ntBASIC5.64□□□□□ -1.51
CLTCL1P53675 PAICSP4-201ENST00000517543 1253 ntBASIC5.64□□□□□ -1.51
CLTCL1P53675 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.64□□□□□ -1.51
CLTCL1P53675 RN7SL339P-201ENST00000580597 296 ntBASIC5.64□□□□□ -1.51
CLTCL1P53675 OR7M1P-201ENST00000608946 533 ntBASIC5.64□□□□□ -1.51
CLTCL1P53675 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.64□□□□□ -1.51
CLTCL1P53675 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.64□□□□□ -1.51
CLTCL1P53675 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.64□□□□□ -1.51
CLTCL1P53675 AC233968.1-201ENST00000611212 1300 ntBASIC5.64□□□□□ -1.51
CLTCL1P53675 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLTCL1P53675 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLTCL1P53675 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLTCL1P53675 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.64□□□□□ -1.51
CLTCL1P53675 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLTCL1P53675 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
CLTCL1P53675 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLTCL1P53675 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.63□□□□□ -1.51
CLTCL1P53675 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.63□□□□□ -1.51
CLTCL1P53675 Y_RNA.333-201ENST00000365274 102 ntBASIC5.63□□□□□ -1.51
CLTCL1P53675 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CLTCL1P53675 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLTCL1P53675 HIGD1AP4-201ENST00000430194 280 ntBASIC5.63□□□□□ -1.51
CLTCL1P53675 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.63□□□□□ -1.51
CLTCL1P53675 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms