Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.39□□□□□ -1.55
NEK3P51956 HMGB1P49-201ENST00000418882 569 ntBASIC5.39□□□□□ -1.55
NEK3P51956 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.39□□□□□ -1.55
NEK3P51956 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.39□□□□□ -1.55
NEK3P51956 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NEK3P51956 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.39□□□□□ -1.55
NEK3P51956 AC124944.2-201ENST00000429866 1242 ntBASIC5.39□□□□□ -1.55
NEK3P51956 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.39□□□□□ -1.55
NEK3P51956 AL034418.1-201ENST00000448675 860 ntBASIC5.39□□□□□ -1.55
NEK3P51956 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.39□□□□□ -1.55
NEK3P51956 RPS15AP1-201ENST00000457423 391 ntBASIC5.39□□□□□ -1.55
NEK3P51956 APOOP2-201ENST00000461561 539 ntBASIC5.39□□□□□ -1.55
NEK3P51956 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.39□□□□□ -1.55
NEK3P51956 AC008953.1-201ENST00000497334 318 ntBASIC5.39□□□□□ -1.55
NEK3P51956 HMGB1P21-201ENST00000502313 581 ntBASIC5.39□□□□□ -1.55
NEK3P51956 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.39□□□□□ -1.55
NEK3P51956 OR5M14P-201ENST00000506803 618 ntBASIC5.39□□□□□ -1.55
NEK3P51956 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.39□□□□□ -1.55
NEK3P51956 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.39□□□□□ -1.55
NEK3P51956 AC022832.1-201ENST00000530718 645 ntBASIC5.39□□□□□ -1.55
NEK3P51956 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.39□□□□□ -1.55
NEK3P51956 AL390334.1-201ENST00000556395 450 ntBASIC5.39□□□□□ -1.55
NEK3P51956 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.39□□□□□ -1.55
NEK3P51956 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.39□□□□□ -1.55
NEK3P51956 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.39□□□□□ -1.55
NEK3P51956 AC006272.2-201ENST00000594725 163 ntBASIC5.39□□□□□ -1.55
NEK3P51956 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.39□□□□□ -1.55
NEK3P51956 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.39□□□□□ -1.55
NEK3P51956 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.39□□□□□ -1.55
NEK3P51956 BNIP3P41-202ENST00000616656 861 ntBASIC5.39□□□□□ -1.55
NEK3P51956 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
NEK3P51956 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.39□□□□□ -1.55
NEK3P51956 AP000770.2-201ENST00000623694 100 ntBASIC5.39□□□□□ -1.55
NEK3P51956 AC090506.2-201ENST00000624521 419 ntBASIC5.39□□□□□ -1.55
NEK3P51956 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.39□□□□□ -1.55
NEK3P51956 AC011978.2-201ENST00000569835 2054 ntBASIC5.39□□□□□ -1.55
NEK3P51956 MTND4P10-201ENST00000446199 1363 ntBASIC5.39□□□□□ -1.55
NEK3P51956 MTND4P8-201ENST00000514997 1362 ntBASIC5.39□□□□□ -1.55
NEK3P51956 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.39□□□□□ -1.55
NEK3P51956 AC104260.2-201ENST00000623551 3497 ntBASIC5.39□□□□□ -1.55
NEK3P51956 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.39□□□□□ -1.55
NEK3P51956 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.39□□□□□ -1.55
NEK3P51956 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.39□□□□□ -1.55
NEK3P51956 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
NEK3P51956 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NEK3P51956 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NEK3P51956 RNA5SP391-201ENST00000363456 119 ntBASIC5.38□□□□□ -1.55
NEK3P51956 RNA5SP507-201ENST00000363603 121 ntBASIC5.38□□□□□ -1.55
NEK3P51956 RNU1-43P-201ENST00000365052 165 ntBASIC5.38□□□□□ -1.55
NEK3P51956 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NEK3P51956 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.38□□□□□ -1.55
NEK3P51956 SNORA70-201ENST00000384436 135 ntBASIC5.38□□□□□ -1.55
NEK3P51956 MIR105-1-201ENST00000385222 81 ntBASIC5.38□□□□□ -1.55
NEK3P51956 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.38□□□□□ -1.55
NEK3P51956 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NEK3P51956 RN7SKP273-201ENST00000411392 314 ntBASIC5.38□□□□□ -1.55
NEK3P51956 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NEK3P51956 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.38□□□□□ -1.55
NEK3P51956 AC007559.1-201ENST00000428736 355 ntBASIC5.38□□□□□ -1.55
NEK3P51956 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.38□□□□□ -1.55
NEK3P51956 AC005410.1-202ENST00000460347 485 ntBASIC5.38□□□□□ -1.55
NEK3P51956 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.38□□□□□ -1.55
NEK3P51956 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.38□□□□□ -1.55
NEK3P51956 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.38□□□□□ -1.55
NEK3P51956 ARL2BPP5-201ENST00000523141 481 ntBASIC5.38□□□□□ -1.55
NEK3P51956 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.38□□□□□ -1.55
NEK3P51956 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.38□□□□□ -1.55
NEK3P51956 AC044860.2-201ENST00000561005 179 ntBASIC5.38□□□□□ -1.55
NEK3P51956 AC022884.2-201ENST00000578535 580 ntBASIC5.38□□□□□ -1.55
NEK3P51956 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.38□□□□□ -1.55
NEK3P51956 AL390838.2-201ENST00000602394 274 ntBASIC5.38□□□□□ -1.55
NEK3P51956 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.38□□□□□ -1.55
NEK3P51956 AL021707.7-201ENST00000607991 416 ntBASIC5.38□□□□□ -1.55
NEK3P51956 AC037198.3-201ENST00000616754 526 ntBASIC5.38□□□□□ -1.55
NEK3P51956 AC090527.3-201ENST00000619041 548 ntBASIC5.38□□□□□ -1.55
NEK3P51956 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
NEK3P51956 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.38□□□□□ -1.55
NEK3P51956 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.38□□□□□ -1.55
NEK3P51956 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.38□□□□□ -1.55
NEK3P51956 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NEK3P51956 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
NEK3P51956 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NEK3P51956 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NEK3P51956 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NEK3P51956 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.37□□□□□ -1.55
NEK3P51956 AC016716.1-201ENST00000265882 708 ntBASIC5.37□□□□□ -1.55
NEK3P51956 NACA3P-201ENST00000359690 648 ntBASIC5.37□□□□□ -1.55
NEK3P51956 SNORA74A-201ENST00000364089 198 ntBASIC5.37□□□□□ -1.55
NEK3P51956 RNU6-115P-201ENST00000364310 107 ntBASIC5.37□□□□□ -1.55
NEK3P51956 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NEK3P51956 SNORD116-23-201ENST00000384645 92 ntBASIC5.37□□□□□ -1.55
NEK3P51956 ERHP2-201ENST00000402323 299 ntBASIC5.37□□□□□ -1.55
NEK3P51956 RN7SKP16-201ENST00000410180 299 ntBASIC5.37□□□□□ -1.55
NEK3P51956 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.37□□□□□ -1.55
NEK3P51956 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.37□□□□□ -1.55
NEK3P51956 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.37□□□□□ -1.55
NEK3P51956 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.37□□□□□ -1.55
NEK3P51956 AC090018.1-201ENST00000434369 367 ntBASIC5.37□□□□□ -1.55
NEK3P51956 B3GNT2P1-201ENST00000434960 952 ntBASIC5.37□□□□□ -1.55
NEK3P51956 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms