Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.52□□□□□ -1.37
RNF144AP50876 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.52□□□□□ -1.37
RNF144AP50876 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.52□□□□□ -1.37
RNF144AP50876 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF144AP50876 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF144AP50876 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF144AP50876 ULK4P1-202ENST00000565174 503 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 TVP23CP2-201ENST00000571473 623 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.52□□□□□ -1.37
RNF144AP50876 MIR3942-201ENST00000585264 109 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF144AP50876 AC245052.7-201ENST00000601161 359 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 AC005070.2-201ENST00000604391 260 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 AL161931.1-201ENST00000612768 246 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 AC015712.7-201ENST00000615211 635 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 OR7E161P-202ENST00000641994 1033 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 AL591848.4-201ENST00000567832 3472 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
RNF144AP50876 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF144AP50876 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF144AP50876 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
RNF144AP50876 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF144AP50876 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF144AP50876 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF144AP50876 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF144AP50876 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
RNF144AP50876 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF144AP50876 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF144AP50876 AP000866.6-201ENST00000638898 3579 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF144AP50876 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF144AP50876 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF144AP50876 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF144AP50876 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF144AP50876 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
RNF144AP50876 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF144AP50876 AC020978.6-201ENST00000571197 3177 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF144AP50876 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF144AP50876 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF144AP50876 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
RNF144AP50876 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF144AP50876 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF144AP50876 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.51□□□□□ -1.37
RNF144AP50876 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
RNF144AP50876 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF144AP50876 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF144AP50876 RPL10P16-201ENST00000325000 645 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 RNU1-35P-201ENST00000362782 153 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF144AP50876 RNU6-38P-201ENST00000384085 107 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 RNU6-209P-201ENST00000384118 107 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 Y_RNA.574-201ENST00000384766 95 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 RPL9P21-201ENST00000392269 505 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF144AP50876 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF144AP50876 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF144AP50876 SDHCP3-201ENST00000445371 506 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF144AP50876 HMGB1P7-201ENST00000450921 612 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 SNORA81.1-201ENST00000458922 177 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 RNU6-333P-201ENST00000459117 107 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 RPL21P71-201ENST00000465598 459 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF144AP50876 AL161747.1-201ENST00000480068 358 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF144AP50876 ENPP7P3-201ENST00000509123 241 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF144AP50876 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF144AP50876 RNU6-635P-201ENST00000516651 102 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 RN7SKP40-201ENST00000517211 242 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF144AP50876 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF144AP50876 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF144AP50876 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.51□□□□□ -1.37
RNF144AP50876 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
RNF144AP50876 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF144AP50876 AL132640.2-202ENST00000559732 614 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF144AP50876 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.51□□□□□ -1.37
RNF144AP50876 AL356432.3-201ENST00000568952 465 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 MIR3135A-201ENST00000578460 77 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF144AP50876 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF144AP50876 AL022099.1-201ENST00000604551 712 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 AC022893.3-201ENST00000607665 437 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF144AP50876 AC133104.2-201ENST00000615272 193 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
RNF144AP50876 OR52H1-202ENST00000641796 1061 ntBASIC6.51□□□□□ -1.37
RNF144AP50876 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF144AP50876 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF144AP50876 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF144AP50876 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RNF144AP50876 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF144AP50876 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF144AP50876 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
RNF144AP50876 AC109780.1-201ENST00000451768 1344 ntBASIC6.5□□□□□ -1.37
RNF144AP50876 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms