Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ERCC6-202ENST00000374127 1782 ntBASIC4.47□□□□□ -1.69
TNFSF9P41273 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
TNFSF9P41273 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF9P41273 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.47□□□□□ -1.69
TNFSF9P41273 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
TNFSF9P41273 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF9P41273 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
TNFSF9P41273 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.69
TNFSF9P41273 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.46□□□□□ -1.7
TNFSF9P41273 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFSF9P41273 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TNFSF9P41273 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFSF9P41273 AC093775.1-201ENST00000624154 1868 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TNFSF9P41273 RNA5SP283-201ENST00000365604 119 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 ENSAP1-201ENST00000392855 326 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 AC233289.1-201ENST00000403700 508 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 RPL5P19-201ENST00000404228 893 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 RPL21P65-201ENST00000406094 466 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.46□□□□□ -1.7
TNFSF9P41273 AC108032.1-201ENST00000416706 207 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 HLA-N-201ENST00000437516 135 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 AC006326.1-201ENST00000445465 787 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.46□□□□□ -1.7
TNFSF9P41273 FCF1P7-201ENST00000451185 558 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 AC007537.2-201ENST00000472093 511 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
TNFSF9P41273 DYNLL1P4-201ENST00000549314 266 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TNFSF9P41273 AC106785.1-201ENST00000565935 262 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 RPL23AP87-202ENST00000573039 466 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.46□□□□□ -1.7
TNFSF9P41273 FAM106CP-201ENST00000582212 507 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFSF9P41273 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFSF9P41273 AL031666.3-201ENST00000609320 1006 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.46□□□□□ -1.7
TNFSF9P41273 AC090246.1-201ENST00000616499 426 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TNFSF9P41273 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TNFSF9P41273 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.46□□□□□ -1.7
TNFSF9P41273 AC092162.3-201ENST00000624511 1624 ntBASIC4.46□□□□□ -1.7
TNFSF9P41273 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TNFSF9P41273 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.46□□□□□ -1.7
TNFSF9P41273 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.46□□□□□ -1.7
TNFSF9P41273 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TNFSF9P41273 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TNFSF9P41273 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TNFSF9P41273 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TNFSF9P41273 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
TNFSF9P41273 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TNFSF9P41273 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TNFSF9P41273 MT-RNR1-201ENST00000389680 954 ntBASIC4.45□□□□□ -1.7
TNFSF9P41273 AC025750.1-201ENST00000399891 379 ntBASIC4.45□□□□□ -1.7
TNFSF9P41273 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.45□□□□□ -1.7
TNFSF9P41273 AL607077.1-201ENST00000401718 499 ntBASIC4.45□□□□□ -1.7
TNFSF9P41273 HSPE1P12-201ENST00000412576 301 ntBASIC4.45□□□□□ -1.7
TNFSF9P41273 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.45□□□□□ -1.7
TNFSF9P41273 AC115285.1-201ENST00000424879 736 ntBASIC4.45□□□□□ -1.7
TNFSF9P41273 RPL23AP2-201ENST00000471227 466 ntBASIC4.45□□□□□ -1.7
TNFSF9P41273 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TNFSF9P41273 AC108064.1-201ENST00000513791 460 ntBASIC4.45□□□□□ -1.7
TNFSF9P41273 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.45□□□□□ -1.7
TNFSF9P41273 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.45□□□□□ -1.7
TNFSF9P41273 AC011270.1-201ENST00000558606 583 ntBASIC4.45□□□□□ -1.7
TNFSF9P41273 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.45□□□□□ -1.7
TNFSF9P41273 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.45□□□□□ -1.7
TNFSF9P41273 MIR5684-201ENST00000585074 65 ntBASIC4.45□□□□□ -1.7
TNFSF9P41273 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.45□□□□□ -1.7
TNFSF9P41273 MIR432-201ENST00000606207 94 ntBASIC4.45□□□□□ -1.7
TNFSF9P41273 RNU4-89P-201ENST00000607443 133 ntBASIC4.45□□□□□ -1.7
TNFSF9P41273 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TNFSF9P41273 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.45□□□□□ -1.7
TNFSF9P41273 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TNFSF9P41273 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.44□□□□□ -1.7
TNFSF9P41273 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.44□□□□□ -1.7
TNFSF9P41273 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TNFSF9P41273 USP9YP4-201ENST00000424401 1745 ntBASIC4.44□□□□□ -1.7
TNFSF9P41273 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TNFSF9P41273 RNA5SP105-201ENST00000391123 113 ntBASIC4.44□□□□□ -1.7
TNFSF9P41273 VDAC2P1-201ENST00000399358 958 ntBASIC4.44□□□□□ -1.7
TNFSF9P41273 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.44□□□□□ -1.7
TNFSF9P41273 AP000357.1-201ENST00000409926 1165 ntBASIC4.44□□□□□ -1.7
TNFSF9P41273 RN7SKP97-201ENST00000410966 333 ntBASIC4.44□□□□□ -1.7
TNFSF9P41273 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.44□□□□□ -1.7
TNFSF9P41273 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.44□□□□□ -1.7
TNFSF9P41273 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.44□□□□□ -1.7
TNFSF9P41273 AL117339.2-201ENST00000430475 180 ntBASIC4.44□□□□□ -1.7
TNFSF9P41273 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.44□□□□□ -1.7
TNFSF9P41273 TBCAP1-201ENST00000436520 327 ntBASIC4.44□□□□□ -1.7
TNFSF9P41273 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.44□□□□□ -1.7
TNFSF9P41273 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.44□□□□□ -1.7
TNFSF9P41273 AL133244.1-201ENST00000456007 258 ntBASIC4.44□□□□□ -1.7
TNFSF9P41273 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.44□□□□□ -1.7
TNFSF9P41273 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.44□□□□□ -1.7
TNFSF9P41273 PPBPP1-201ENST00000510807 373 ntBASIC4.44□□□□□ -1.7
TNFSF9P41273 RNU7-143P-201ENST00000516781 65 ntBASIC4.44□□□□□ -1.7
TNFSF9P41273 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.44□□□□□ -1.7
TNFSF9P41273 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.44□□□□□ -1.7
TNFSF9P41273 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms