Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC6A4P31645 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC6A4P31645 HMGB1P5-201ENST00000255320 642 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.37□□□□□ -1.55
SLC6A4P31645 Y_RNA.51-201ENST00000362725 102 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC6A4P31645 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC6A4P31645 MIR589-201ENST00000385238 99 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SLC6A4P31645 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.37□□□□□ -1.55
SLC6A4P31645 NUDT19P3-201ENST00000404698 555 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC6A4P31645 RNU6-757P-201ENST00000410334 100 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 RN7SKP222-201ENST00000410651 315 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 RN7SKP213-201ENST00000410746 298 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC6A4P31645 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC6A4P31645 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC6A4P31645 GAPDHP49-201ENST00000421421 961 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 MTCO1P54-201ENST00000430139 712 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 PSMD10P3-201ENST00000437000 448 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 RPS29P10-201ENST00000439197 166 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 ELOCP8-201ENST00000439309 332 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 RPL23AP76-201ENST00000441860 458 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 ELOCP15-201ENST00000442090 332 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 AC090804.1-201ENST00000448870 490 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 MTCO3P16-201ENST00000454456 754 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC6A4P31645 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC6A4P31645 RPL30P6-201ENST00000475925 342 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 RPL7AP6-201ENST00000477943 801 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 RPL7P18-201ENST00000478965 734 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 RN7SL814P-201ENST00000487715 300 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 AC004453.1-201ENST00000487895 408 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 NDUFA5P12-201ENST00000503796 343 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC6A4P31645 AC104090.1-201ENST00000506341 1171 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC6A4P31645 NDUFB5P1-201ENST00000508134 564 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC6A4P31645 EIF3KP3-201ENST00000514461 639 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC6A4P31645 EIF4A2P5-201ENST00000529914 499 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC6A4P31645 UBE2NP1-201ENST00000545592 458 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC6A4P31645 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC6A4P31645 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.37□□□□□ -1.55
SLC6A4P31645 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC6A4P31645 AC087763.1-201ENST00000603391 286 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC6A4P31645 Z69908.1-201ENST00000622603 247 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 AL359757.1-201ENST00000623176 255 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.37□□□□□ -1.55
SLC6A4P31645 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SLC6A4P31645 MTND4P5-201ENST00000435821 1374 ntBASIC5.37□□□□□ -1.55
SLC6A4P31645 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC6A4P31645 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC6A4P31645 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SLC6A4P31645 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC6A4P31645 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SLC6A4P31645 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SLC6A4P31645 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SLC6A4P31645 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
SLC6A4P31645 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
SLC6A4P31645 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC6A4P31645 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC6A4P31645 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC6A4P31645 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC6A4P31645 ADAM24P-201ENST00000398655 2101 ntBASIC5.36□□□□□ -1.55
SLC6A4P31645 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SLC6A4P31645 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SLC6A4P31645 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC6A4P31645 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC6A4P31645 AC005005.4-201ENST00000623789 16698 ntBASIC5.36□□□□□ -1.55
SLC6A4P31645 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC6A4P31645 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SLC6A4P31645 MIR585-201ENST00000384887 94 ntBASIC5.36□□□□□ -1.55
SLC6A4P31645 OR8V1P-201ENST00000395193 873 ntBASIC5.36□□□□□ -1.55
SLC6A4P31645 TMSB4XP8-201ENST00000402089 135 ntBASIC5.36□□□□□ -1.55
SLC6A4P31645 RNU6-575P-201ENST00000411326 105 ntBASIC5.36□□□□□ -1.55
SLC6A4P31645 TMSB4XP6-201ENST00000415187 135 ntBASIC5.36□□□□□ -1.55
SLC6A4P31645 TMSB4XP1-201ENST00000424567 135 ntBASIC5.36□□□□□ -1.55
SLC6A4P31645 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC6A4P31645 RPS27AP6-201ENST00000427962 448 ntBASIC5.36□□□□□ -1.55
SLC6A4P31645 RPL7AP49-201ENST00000429522 581 ntBASIC5.36□□□□□ -1.55
SLC6A4P31645 AL591438.1-201ENST00000433508 581 ntBASIC5.36□□□□□ -1.55
SLC6A4P31645 ATP5F1P1-201ENST00000433775 569 ntBASIC5.36□□□□□ -1.55
SLC6A4P31645 HMGB1P45-201ENST00000435986 653 ntBASIC5.36□□□□□ -1.55
SLC6A4P31645 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC6A4P31645 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC6A4P31645 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC6A4P31645 AL606662.1-201ENST00000445763 553 ntBASIC5.36□□□□□ -1.55
SLC6A4P31645 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC6A4P31645 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC6A4P31645 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC6A4P31645 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC6A4P31645 VPS26AP1-201ENST00000483197 979 ntBASIC5.36□□□□□ -1.55
SLC6A4P31645 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC6A4P31645 MTCYBP16-201ENST00000509187 1129 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms