Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM4SF1P30408 AC097374.1-203ENST00000400783 485 ntBASIC5.44□□□□□ -1.54
TM4SF1P30408 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM4SF1P30408 AL353692.2-201ENST00000407054 335 ntBASIC5.44□□□□□ -1.54
TM4SF1P30408 RN7SKP182-201ENST00000410772 298 ntBASIC5.44□□□□□ -1.54
TM4SF1P30408 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.44□□□□□ -1.54
TM4SF1P30408 MRPL48P1-201ENST00000445390 636 ntBASIC5.44□□□□□ -1.54
TM4SF1P30408 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.44□□□□□ -1.54
TM4SF1P30408 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.44□□□□□ -1.54
TM4SF1P30408 RN7SL812P-201ENST00000493791 279 ntBASIC5.44□□□□□ -1.54
TM4SF1P30408 AC010460.1-201ENST00000507087 466 ntBASIC5.44□□□□□ -1.54
TM4SF1P30408 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.44□□□□□ -1.54
TM4SF1P30408 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.44□□□□□ -1.54
TM4SF1P30408 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.44□□□□□ -1.54
TM4SF1P30408 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.44□□□□□ -1.54
TM4SF1P30408 AL021997.2-201ENST00000615674 271 ntBASIC5.44□□□□□ -1.54
TM4SF1P30408 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.44□□□□□ -1.54
TM4SF1P30408 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.44□□□□□ -1.54
TM4SF1P30408 AC012442.3-202ENST00000636742 206 ntBASIC5.44□□□□□ -1.54
TM4SF1P30408 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM4SF1P30408 AC133552.1-201ENST00000569988 4007 ntBASIC5.44□□□□□ -1.54
TM4SF1P30408 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.44□□□□□ -1.54
TM4SF1P30408 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM4SF1P30408 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TM4SF1P30408 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM4SF1P30408 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM4SF1P30408 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.43□□□□□ -1.54
TM4SF1P30408 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM4SF1P30408 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM4SF1P30408 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
TM4SF1P30408 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.43□□□□□ -1.54
TM4SF1P30408 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.43□□□□□ -1.54
TM4SF1P30408 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM4SF1P30408 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM4SF1P30408 SNORA11.1-201ENST00000408133 129 ntBASIC5.43□□□□□ -1.54
TM4SF1P30408 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.43□□□□□ -1.54
TM4SF1P30408 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.43□□□□□ -1.54
TM4SF1P30408 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.43□□□□□ -1.54
TM4SF1P30408 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.43□□□□□ -1.54
TM4SF1P30408 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.43□□□□□ -1.54
TM4SF1P30408 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TM4SF1P30408 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.43□□□□□ -1.54
TM4SF1P30408 AC010374.1-201ENST00000503762 1237 ntBASIC5.43□□□□□ -1.54
TM4SF1P30408 AL592156.1-201ENST00000508758 304 ntBASIC5.43□□□□□ -1.54
TM4SF1P30408 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.43□□□□□ -1.54
TM4SF1P30408 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.43□□□□□ -1.54
TM4SF1P30408 VTA1P2-201ENST00000520205 911 ntBASIC5.43□□□□□ -1.54
TM4SF1P30408 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.43□□□□□ -1.54
TM4SF1P30408 HIGD1AP18-201ENST00000520730 278 ntBASIC5.43□□□□□ -1.54
TM4SF1P30408 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.43□□□□□ -1.54
TM4SF1P30408 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.43□□□□□ -1.54
TM4SF1P30408 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.43□□□□□ -1.54
TM4SF1P30408 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.43□□□□□ -1.54
TM4SF1P30408 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.43□□□□□ -1.54
TM4SF1P30408 ZNF92P2-201ENST00000600543 1059 ntBASIC5.43□□□□□ -1.54
TM4SF1P30408 AC067931.1-201ENST00000624190 671 ntBASIC5.43□□□□□ -1.54
TM4SF1P30408 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.43□□□□□ -1.54
TM4SF1P30408 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM4SF1P30408 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.43□□□□□ -1.54
TM4SF1P30408 TTC39DP-201ENST00000416781 1688 ntBASIC5.43□□□□□ -1.54
TM4SF1P30408 AL359922.3-201ENST00000624779 1670 ntBASIC5.43□□□□□ -1.54
TM4SF1P30408 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM4SF1P30408 AL627171.1-201ENST00000618845 1308 ntBASIC5.43□□□□□ -1.54
TM4SF1P30408 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TM4SF1P30408 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM4SF1P30408 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.43□□□□□ -1.54
TM4SF1P30408 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.42□□□□□ -1.54
TM4SF1P30408 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
TM4SF1P30408 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TM4SF1P30408 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
TM4SF1P30408 GVINP1-202ENST00000531871 7271 ntBASIC5.42□□□□□ -1.54
TM4SF1P30408 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TM4SF1P30408 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.42□□□□□ -1.54
TM4SF1P30408 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
TM4SF1P30408 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
TM4SF1P30408 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TM4SF1P30408 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TM4SF1P30408 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TM4SF1P30408 RNU6-609P-201ENST00000365459 107 ntBASIC5.42□□□□□ -1.54
TM4SF1P30408 RNU6-761P-201ENST00000384148 107 ntBASIC5.42□□□□□ -1.54
TM4SF1P30408 RNU6-532P-201ENST00000384318 107 ntBASIC5.42□□□□□ -1.54
TM4SF1P30408 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TM4SF1P30408 AC012497.1-201ENST00000429392 575 ntBASIC5.42□□□□□ -1.54
TM4SF1P30408 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TM4SF1P30408 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.42□□□□□ -1.54
TM4SF1P30408 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.42□□□□□ -1.54
TM4SF1P30408 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.42□□□□□ -1.54
TM4SF1P30408 RPL6P5-201ENST00000445678 828 ntBASIC5.42□□□□□ -1.54
TM4SF1P30408 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.42□□□□□ -1.54
TM4SF1P30408 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.42□□□□□ -1.54
TM4SF1P30408 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.42□□□□□ -1.54
TM4SF1P30408 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.42□□□□□ -1.54
TM4SF1P30408 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.42□□□□□ -1.54
TM4SF1P30408 NPM1P35-201ENST00000533043 868 ntBASIC5.42□□□□□ -1.54
TM4SF1P30408 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.42□□□□□ -1.54
TM4SF1P30408 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.42□□□□□ -1.54
TM4SF1P30408 CD24P2-201ENST00000565486 219 ntBASIC5.42□□□□□ -1.54
TM4SF1P30408 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.42□□□□□ -1.54
TM4SF1P30408 AC098483.2-201ENST00000603158 454 ntBASIC5.42□□□□□ -1.54
TM4SF1P30408 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms