Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 RN7SKP23-201ENST00000625159 4301 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 Y_RNA.20-201ENST00000362479 113 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 Y_RNA.462-201ENST00000384268 102 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 U3.25-201ENST00000391209 220 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC7.42□□□□□ -1.22
COL9A1P20849 RNU2-71P-201ENST00000411395 189 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL9A1P20849 GJA6P-201ENST00000415117 1042 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC7.42□□□□□ -1.22
COL9A1P20849 RPS3P2-201ENST00000421346 701 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 AHCYP8-201ENST00000425108 209 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 AL645936.1-201ENST00000441979 518 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 NEFMP1-201ENST00000443423 1006 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.42□□□□□ -1.22
COL9A1P20849 LAMTOR5P1-201ENST00000444290 270 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 AL136981.1-203ENST00000451452 3844 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 AL353752.1-201ENST00000454946 260 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 RPS3AP41-201ENST00000462701 778 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 PPIAP19-201ENST00000486414 492 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.42□□□□□ -1.22
COL9A1P20849 AC096754.1-201ENST00000508904 818 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 RN7SKP92-201ENST00000517266 244 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.42□□□□□ -1.22
COL9A1P20849 NDUFA3P4-201ENST00000560814 250 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC7.42□□□□□ -1.22
COL9A1P20849 AC133644.2-201ENST00000608142 540 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC7.42□□□□□ -1.22
COL9A1P20849 SDR42E1P2-201ENST00000614861 481 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 WWOX-217ENST00000620008 450 ntTSL 2 BASIC7.42□□□□□ -1.22
COL9A1P20849 SDR42E1P4-201ENST00000620894 481 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC7.42□□□□□ -1.22
COL9A1P20849 AC008626.2-201ENST00000624425 248 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC7.42□□□□□ -1.22
COL9A1P20849 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC7.42□□□□□ -1.22
COL9A1P20849 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL9A1P20849 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
COL9A1P20849 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL9A1P20849 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL9A1P20849 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL9A1P20849 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
COL9A1P20849 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.42□□□□□ -1.22
COL9A1P20849 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.42□□□□□ -1.22
COL9A1P20849 AL121950.1-201ENST00000624993 2077 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
COL9A1P20849 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC7.42□□□□□ -1.22
COL9A1P20849 SOCS5P3-201ENST00000425115 1576 ntBASIC7.42□□□□□ -1.22
COL9A1P20849 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
COL9A1P20849 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.41□□□□□ -1.22
COL9A1P20849 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL9A1P20849 AC002525.1-201ENST00000624392 1622 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
COL9A1P20849 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
COL9A1P20849 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.41□□□□□ -1.22
COL9A1P20849 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC7.41□□□□□ -1.22
COL9A1P20849 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC7.41□□□□□ -1.22
COL9A1P20849 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL9A1P20849 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.41□□□□□ -1.22
COL9A1P20849 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC7.41□□□□□ -1.22
COL9A1P20849 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC7.41□□□□□ -1.22
COL9A1P20849 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.41□□□□□ -1.22
COL9A1P20849 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC7.41□□□□□ -1.22
COL9A1P20849 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC7.41□□□□□ -1.22
COL9A1P20849 RNU6-444P-201ENST00000383988 108 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 RNU6-1081P-201ENST00000384537 107 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 RNA5SP176-201ENST00000390956 110 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 DSTNP4-201ENST00000399472 474 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 EIF5P1-201ENST00000400019 1231 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.41□□□□□ -1.22
COL9A1P20849 HMGN1P20-201ENST00000411849 300 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 NMD3P2-201ENST00000421815 761 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 EEF1GP7-201ENST00000422983 703 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 AC010881.1-201ENST00000433830 235 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL9A1P20849 FTH1P25-201ENST00000447665 469 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC7.41□□□□□ -1.22
COL9A1P20849 NXT1P1-201ENST00000458481 316 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC7.41□□□□□ -1.22
COL9A1P20849 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL9A1P20849 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC7.41□□□□□ -1.22
COL9A1P20849 DCAF13P2-201ENST00000514188 555 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 RNU6-202P-201ENST00000515998 96 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 RNA5SP441-201ENST00000516809 88 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL9A1P20849 IGKV2-36-201ENST00000519999 223 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.41□□□□□ -1.22
COL9A1P20849 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.41□□□□□ -1.22
COL9A1P20849 LARP7P2-201ENST00000575306 125 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 RN7SL366P-201ENST00000577957 292 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 AC005899.2-201ENST00000584353 90 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
COL9A1P20849 AC006557.5-201ENST00000603126 811 ntBASIC7.41□□□□□ -1.22
COL9A1P20849 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC7.41□□□□□ -1.22
COL9A1P20849 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC7.41□□□□□ -1.22
COL9A1P20849 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.41□□□□□ -1.22
COL9A1P20849 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL9A1P20849 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL9A1P20849 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL9A1P20849 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL9A1P20849 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms