Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DOBP13765 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DOBP13765 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DOBP13765 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DOBP13765 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DOBP13765 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DOBP13765 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DOBP13765 OR7E18P-201ENST00000592589 702 ntBASIC4.36□□□□□ -1.71
HLA-DOBP13765 VN1R78P-201ENST00000597393 564 ntBASIC4.36□□□□□ -1.71
HLA-DOBP13765 AC011453.2-201ENST00000603737 729 ntBASIC4.36□□□□□ -1.71
HLA-DOBP13765 AC016877.3-201ENST00000606778 504 ntBASIC4.36□□□□□ -1.71
HLA-DOBP13765 AC007349.4-201ENST00000608114 532 ntBASIC4.36□□□□□ -1.71
HLA-DOBP13765 AL445423.1-201ENST00000609941 536 ntBASIC4.36□□□□□ -1.71
HLA-DOBP13765 AC009237.15-201ENST00000610252 501 ntBASIC4.36□□□□□ -1.71
HLA-DOBP13765 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DOBP13765 VN1R74P-201ENST00000613259 503 ntBASIC4.36□□□□□ -1.71
HLA-DOBP13765 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DOBP13765 AP002967.1-201ENST00000624203 539 ntBASIC4.36□□□□□ -1.71
HLA-DOBP13765 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DOBP13765 U6.107-201ENST00000637108 79 ntBASIC4.36□□□□□ -1.71
HLA-DOBP13765 LINC02211-204ENST00000642024 1070 ntBASIC4.36□□□□□ -1.71
HLA-DOBP13765 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DOBP13765 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DOBP13765 AC099654.2-201ENST00000433031 1980 ntBASIC4.36□□□□□ -1.71
HLA-DOBP13765 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DOBP13765 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DOBP13765 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DOBP13765 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DOBP13765 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DOBP13765 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DOBP13765 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DOBP13765 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DOBP13765 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DOBP13765 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DOBP13765 AL137100.1-201ENST00000556703 1620 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOBP13765 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOBP13765 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOBP13765 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOBP13765 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOBP13765 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 RN7SKP104-201ENST00000362605 328 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 SNORA62.2-201ENST00000364672 152 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 SPTLC1P2-201ENST00000407089 121 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 RN7SKP278-201ENST00000410504 342 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC092745.2-202ENST00000411880 369 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 OR2AH1P-201ENST00000425717 928 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 PSMD10P3-201ENST00000437000 448 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 RPL31P44-201ENST00000447680 377 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC096741.1-201ENST00000472250 846 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOBP13765 RPL7AP6-201ENST00000477943 801 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 OR5M14P-201ENST00000506803 618 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 HMGB3P16-201ENST00000508037 287 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOBP13765 MTCO3P15-201ENST00000526563 574 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC124293.1-201ENST00000530034 493 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 GCSHP4-201ENST00000538792 439 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC090695.1-201ENST00000561269 1222 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC021171.1-201ENST00000603137 706 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC009948.4-201ENST00000604692 675 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC087783.2-201ENST00000605070 562 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC090525.3-201ENST00000605601 189 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOBP13765 MTCO1P6-201ENST00000481192 1384 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOBP13765 AC100871.1-201ENST00000507871 1456 ntBASIC4.35□□□□□ -1.71
HLA-DOBP13765 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOBP13765 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DOBP13765 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOBP13765 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOBP13765 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DOBP13765 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
HLA-DOBP13765 SCN1A-220ENST00000641603 12506 ntBASIC4.34□□□□□ -1.71
HLA-DOBP13765 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms