Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 Y_RNA.18-201ENST00000362461 102 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 RNU5D-1-201ENST00000363299 116 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 SNORA4.1-201ENST00000364263 144 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 Y_RNA.509-201ENST00000384506 99 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 MIR223-201ENST00000385204 110 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AC002524.1-201ENST00000411687 547 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 RPL21P32-201ENST00000419877 477 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AL139413.1-201ENST00000421309 217 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AL133173.1-201ENST00000423458 397 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 Z93242.1-201ENST00000427102 353 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AL139148.1-201ENST00000427122 680 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AC022022.1-201ENST00000430304 178 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 ANKRD30BP3-201ENST00000444850 1070 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 OR7E116P-201ENST00000448529 957 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 RNA5SP269-201ENST00000459032 137 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 OR9M1P-201ENST00000459641 921 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 KLF3P2-201ENST00000465138 268 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 RPL7P39-201ENST00000481157 744 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AC090071.1-201ENST00000507713 644 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 NRBF2P4-201ENST00000520874 850 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AP005119.2-201ENST00000579735 1105 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AC024940.4-201ENST00000605507 246 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AC055764.2-201ENST00000610089 670 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AC025048.6-202ENST00000627667 438 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 LRRC77P-213ENST00000637727 880 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 AC046144.1-201ENST00000478559 1853 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AC022905.1-201ENST00000503430 3048 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AC006026.1-201ENST00000444025 1803 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AL159987.1-201ENST00000347911 293 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 Y_RNA.38-201ENST00000362617 102 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 RNU6-839P-201ENST00000363347 108 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 HIST1H3PS1-201ENST00000404612 417 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 MYL6P5-201ENST00000412707 459 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 RPL21P108-201ENST00000413857 481 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 GLRXP1-201ENST00000423261 334 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AC008072.1-201ENST00000434254 824 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 RPS25P9-201ENST00000435591 252 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 MTATP6P30-201ENST00000443540 664 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 MTCO3P11-201ENST00000455103 774 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 SETP14-201ENST00000497538 873 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 IMPA1P1-201ENST00000510718 842 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AC124947.2-202ENST00000552735 133 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 OR4H6P-201ENST00000563771 921 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AC006504.3-201ENST00000586818 523 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AP000942.4-201ENST00000604811 241 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AC104458.1-201ENST00000608243 463 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AC005962.2-201ENST00000611427 652 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 AC009159.1-201ENST00000618386 642 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 DDX18P4-201ENST00000511690 1966 ntBASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.73□□□□□ -1.17
CSB-PGBD3P0DP91 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CSB-PGBD3P0DP91 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CSB-PGBD3P0DP91 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.72□□□□□ -1.17
CSB-PGBD3P0DP91 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CSB-PGBD3P0DP91 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CSB-PGBD3P0DP91 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms