Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CNOT4O95628 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.43□□□□□ -1.54
CNOT4O95628 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNOT4O95628 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
CNOT4O95628 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNOT4O95628 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.43□□□□□ -1.54
CNOT4O95628 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNOT4O95628 AC114546.3-201ENST00000623582 1734 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 MTCO1P6-201ENST00000481192 1384 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 BTBD10P1-201ENST00000549824 1352 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.42□□□□□ -1.54
CNOT4O95628 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.42□□□□□ -1.54
CNOT4O95628 AL445437.1-201ENST00000623157 3087 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CNOT4O95628 AC005332.5-201ENST00000591222 2919 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CNOT4O95628 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNOT4O95628 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CNOT4O95628 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNOT4O95628 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CNOT4O95628 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.42□□□□□ -1.54
CNOT4O95628 RNU1-134P-201ENST00000362935 165 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 RNU6-660P-201ENST00000364566 109 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 Y_RNA.813-201ENST00000364639 102 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CNOT4O95628 SNORA51.9-201ENST00000384295 124 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CNOT4O95628 CYCSP45-201ENST00000402289 315 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 AL139098.1-201ENST00000407291 389 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 AC116036.1-201ENST00000412199 367 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.42□□□□□ -1.54
CNOT4O95628 AC245096.1-201ENST00000413104 546 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 USP9YP6-201ENST00000413550 854 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.42□□□□□ -1.54
CNOT4O95628 GLRXP1-201ENST00000423261 334 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.42□□□□□ -1.54
CNOT4O95628 AC245884.2-201ENST00000426257 404 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 AC073069.1-201ENST00000428657 441 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.42□□□□□ -1.54
CNOT4O95628 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.42□□□□□ -1.54
CNOT4O95628 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.42□□□□□ -1.54
CNOT4O95628 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CNOT4O95628 AC000111.3-201ENST00000433478 193 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.42□□□□□ -1.54
CNOT4O95628 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CNOT4O95628 MTCO1P48-201ENST00000448024 1096 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 RPL31P15-201ENST00000449770 338 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 USP9YP34-201ENST00000453983 808 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 RPL37P3-201ENST00000456825 293 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 NXT1P1-201ENST00000458481 316 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 RPS4XP12-201ENST00000461747 709 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 AC098847.1-201ENST00000473094 348 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 AL161747.1-201ENST00000480068 358 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.42□□□□□ -1.54
CNOT4O95628 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.42□□□□□ -1.54
CNOT4O95628 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
CNOT4O95628 CYP4F27P-201ENST00000514557 494 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 RN7SKP67-201ENST00000515905 235 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 RNU6-314P-201ENST00000516574 104 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.42□□□□□ -1.54
CNOT4O95628 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.42□□□□□ -1.54
CNOT4O95628 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.42□□□□□ -1.54
CNOT4O95628 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.42□□□□□ -1.54
CNOT4O95628 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.42□□□□□ -1.54
CNOT4O95628 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.42□□□□□ -1.54
CNOT4O95628 MIR4528-201ENST00000577763 90 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.42□□□□□ -1.54
CNOT4O95628 MIR4443-201ENST00000585052 53 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 AC090236.2-201ENST00000587933 1101 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.42□□□□□ -1.54
CNOT4O95628 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.42□□□□□ -1.54
CNOT4O95628 AC011453.2-201ENST00000603737 729 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.42□□□□□ -1.54
CNOT4O95628 AC091304.9-201ENST00000612091 226 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 AC245014.3-201ENST00000618589 347 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 AL512652.1-201ENST00000619006 500 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 CR381653.2-201ENST00000624041 768 ntBASIC5.42□□□□□ -1.54
CNOT4O95628 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.42□□□□□ -1.54
CNOT4O95628 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.42□□□□□ -1.54
CNOT4O95628 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CNOT4O95628 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNOT4O95628 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CNOT4O95628 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.42□□□□□ -1.54
CNOT4O95628 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CNOT4O95628 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.42□□□□□ -1.54
CNOT4O95628 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CNOT4O95628 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CNOT4O95628 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.42□□□□□ -1.54
CNOT4O95628 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.42□□□□□ -1.54
CNOT4O95628 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.42□□□□□ -1.54
CNOT4O95628 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CNOT4O95628 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.42□□□□□ -1.54
CNOT4O95628 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.41□□□□□ -1.54
CNOT4O95628 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CNOT4O95628 AC090971.4-201ENST00000560291 1800 ntBASIC5.41□□□□□ -1.54
CNOT4O95628 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CNOT4O95628 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.41□□□□□ -1.54
CNOT4O95628 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms