Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.9□□□□□ -1.63
SMAD6O43541 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.9□□□□□ -1.63
SMAD6O43541 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 RN7SL558P-201ENST00000497468 299 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.9□□□□□ -1.63
SMAD6O43541 SCARNA22-201ENST00000503991 125 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.9□□□□□ -1.63
SMAD6O43541 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.9□□□□□ -1.63
SMAD6O43541 FABP5P6-201ENST00000510588 409 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.9□□□□□ -1.63
SMAD6O43541 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.9□□□□□ -1.63
SMAD6O43541 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.9□□□□□ -1.63
SMAD6O43541 RPL23AP53-201ENST00000521854 457 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.9□□□□□ -1.63
SMAD6O43541 PDCD5P1-201ENST00000543528 309 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC133555.2-201ENST00000550213 292 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.9□□□□□ -1.63
SMAD6O43541 AC093249.4-201ENST00000564755 259 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC027455.1-201ENST00000574104 594 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AP001094.1-201ENST00000579805 193 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 SNORA74C-1-201ENST00000580726 201 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 MIR4270-201ENST00000581799 70 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC005242.1-201ENST00000585658 438 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.9□□□□□ -1.63
SMAD6O43541 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SMAD6O43541 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.9□□□□□ -1.63
SMAD6O43541 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.9□□□□□ -1.63
SMAD6O43541 AL121932.1-201ENST00000605542 214 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC013562.2-201ENST00000611632 603 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC011939.3-201ENST00000613686 466 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.9□□□□□ -1.63
SMAD6O43541 AC009318.3-201ENST00000616916 503 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SMAD6O43541 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SMAD6O43541 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.9□□□□□ -1.63
SMAD6O43541 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SMAD6O43541 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.9□□□□□ -1.63
SMAD6O43541 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SMAD6O43541 MTND4P4-201ENST00000439033 1366 ntBASIC4.9□□□□□ -1.63
SMAD6O43541 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SMAD6O43541 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.9□□□□□ -1.63
SMAD6O43541 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SMAD6O43541 AC010928.1-201ENST00000592477 1447 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.89□□□□□ -1.63
SMAD6O43541 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SMAD6O43541 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.89□□□□□ -1.63
SMAD6O43541 BX005019.1-201ENST00000561881 1810 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SMAD6O43541 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SMAD6O43541 Y_RNA.169-201ENST00000363745 96 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SMAD6O43541 HMGB3P19-201ENST00000403971 560 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 MIR1302-8-201ENST00000408342 128 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.89□□□□□ -1.63
SMAD6O43541 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.89□□□□□ -1.63
SMAD6O43541 RPS24P7-201ENST00000416921 246 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 FABP7P2-201ENST00000429946 379 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 RPS17P8-201ENST00000434525 335 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.89□□□□□ -1.63
SMAD6O43541 RPL35AP21-201ENST00000437667 333 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.89□□□□□ -1.63
SMAD6O43541 FABP5P3-201ENST00000437960 408 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 GSTA7P-201ENST00000438425 448 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 MTCYBP12-201ENST00000440559 1134 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 AL358794.1-201ENST00000445689 381 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.89□□□□□ -1.63
SMAD6O43541 AC069540.1-201ENST00000446320 988 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 AC004022.1-201ENST00000447766 1066 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.89□□□□□ -1.63
SMAD6O43541 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 BET1P1-201ENST00000482276 359 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 OR5H3P-201ENST00000502817 919 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SMAD6O43541 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.89□□□□□ -1.63
SMAD6O43541 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.89□□□□□ -1.63
SMAD6O43541 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.89□□□□□ -1.63
SMAD6O43541 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.89□□□□□ -1.63
SMAD6O43541 RNU6-709P-201ENST00000517257 104 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SMAD6O43541 BUD31P1-201ENST00000521828 359 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.89□□□□□ -1.63
SMAD6O43541 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.89□□□□□ -1.63
SMAD6O43541 BNIP3P1-201ENST00000547295 580 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 AC137768.1-201ENST00000549998 553 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.89□□□□□ -1.63
SMAD6O43541 RN7SL802P-201ENST00000577858 299 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 AC099785.1-201ENST00000605697 437 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 AP002802.2-201ENST00000605877 235 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 AL096803.3-201ENST00000609032 532 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 AL161616.1-201ENST00000611867 286 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 AL356274.1-201ENST00000617064 410 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.89□□□□□ -1.63
SMAD6O43541 AP003497.2-201ENST00000624220 967 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 TLK1P1-201ENST00000456760 2440 ntBASIC4.89□□□□□ -1.63
SMAD6O43541 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SMAD6O43541 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SMAD6O43541 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SMAD6O43541 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SMAD6O43541 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms