Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
O00370 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
O00370 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.8□□□□□ -1.64
O00370 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
O00370 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
O00370 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
O00370 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
O00370 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
O00370 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.8□□□□□ -1.64
O00370 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.8□□□□□ -1.64
O00370 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.8□□□□□ -1.64
O00370 RPEP3-201ENST00000425462 676 ntBASIC4.8□□□□□ -1.64
O00370 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.8□□□□□ -1.64
O00370 AP001324.1-201ENST00000428553 399 ntBASIC4.8□□□□□ -1.64
O00370 AC074367.1-201ENST00000438685 1125 ntBASIC4.8□□□□□ -1.64
O00370 GEMIN8P3-201ENST00000445417 720 ntBASIC4.8□□□□□ -1.64
O00370 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.8□□□□□ -1.64
O00370 RPS6P2-201ENST00000454208 705 ntBASIC4.8□□□□□ -1.64
O00370 RNU7-27P-201ENST00000459281 62 ntBASIC4.8□□□□□ -1.64
O00370 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.8□□□□□ -1.64
O00370 AC010469.1-201ENST00000463864 576 ntBASIC4.8□□□□□ -1.64
O00370 NIP7P2-201ENST00000485801 544 ntBASIC4.8□□□□□ -1.64
O00370 AC111000.3-201ENST00000508057 576 ntBASIC4.8□□□□□ -1.64
O00370 PGBD4P4-201ENST00000509673 613 ntBASIC4.8□□□□□ -1.64
O00370 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.8□□□□□ -1.64
O00370 SMARCE1P4-201ENST00000523647 241 ntBASIC4.8□□□□□ -1.64
O00370 AC004923.2-201ENST00000529649 369 ntBASIC4.8□□□□□ -1.64
O00370 AC100770.1-201ENST00000532310 322 ntBASIC4.8□□□□□ -1.64
O00370 OR5AN2P-201ENST00000534535 896 ntBASIC4.8□□□□□ -1.64
O00370 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.8□□□□□ -1.64
O00370 AC069240.1-201ENST00000548774 375 ntBASIC4.8□□□□□ -1.64
O00370 AC068446.3-201ENST00000555285 382 ntBASIC4.8□□□□□ -1.64
O00370 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.8□□□□□ -1.64
O00370 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.8□□□□□ -1.64
O00370 HMGB3P26-201ENST00000560051 582 ntBASIC4.8□□□□□ -1.64
O00370 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.8□□□□□ -1.64
O00370 MTND4LP25-201ENST00000570218 163 ntBASIC4.8□□□□□ -1.64
O00370 AL121834.1-201ENST00000572284 509 ntBASIC4.8□□□□□ -1.64
O00370 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.8□□□□□ -1.64
O00370 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.8□□□□□ -1.64
O00370 AC234771.5-201ENST00000600161 514 ntBASIC4.8□□□□□ -1.64
O00370 BPIFA4P-203ENST00000603168 689 ntBASIC4.8□□□□□ -1.64
O00370 MTCO3P22-201ENST00000603219 784 ntBASIC4.8□□□□□ -1.64
O00370 AL133243.1-201ENST00000614487 366 ntBASIC4.8□□□□□ -1.64
O00370 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.8□□□□□ -1.64
O00370 AC106730.3-201ENST00000624568 641 ntBASIC4.8□□□□□ -1.64
O00370 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.8□□□□□ -1.64
O00370 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.8□□□□□ -1.64
O00370 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.8□□□□□ -1.64
O00370 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.8□□□□□ -1.64
O00370 AL592148.3-201ENST00000608771 2646 ntBASIC4.8□□□□□ -1.64
O00370 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
O00370 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.8□□□□□ -1.64
O00370 KPNA2P2-201ENST00000419546 1489 ntBASIC4.8□□□□□ -1.64
O00370 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
O00370 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
O00370 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.8□□□□□ -1.64
O00370 MAPK10-304ENST00000641341 3984 ntBASIC4.8□□□□□ -1.64
O00370 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
O00370 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.79□□□□□ -1.64
O00370 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.79□□□□□ -1.64
O00370 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
O00370 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
O00370 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
O00370 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.79□□□□□ -1.64
O00370 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
O00370 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
O00370 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
O00370 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
O00370 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
O00370 RNU6-666P-201ENST00000363499 107 ntBASIC4.79□□□□□ -1.64
O00370 MIR129-1-201ENST00000384972 72 ntBASIC4.79□□□□□ -1.64
O00370 RNA5SP332-201ENST00000391063 115 ntBASIC4.79□□□□□ -1.64
O00370 RPS3AP23-201ENST00000401762 784 ntBASIC4.79□□□□□ -1.64
O00370 FCF1P5-201ENST00000406490 482 ntBASIC4.79□□□□□ -1.64
O00370 Z86062.1-201ENST00000406773 777 ntBASIC4.79□□□□□ -1.64
O00370 PTGES3P2-201ENST00000407942 482 ntBASIC4.79□□□□□ -1.64
O00370 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.79□□□□□ -1.64
O00370 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.79□□□□□ -1.64
O00370 RPL23AP1-201ENST00000428990 471 ntBASIC4.79□□□□□ -1.64
O00370 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.79□□□□□ -1.64
O00370 RPL23AP43-201ENST00000446445 471 ntBASIC4.79□□□□□ -1.64
O00370 MTND2P6-201ENST00000455337 1030 ntBASIC4.79□□□□□ -1.64
O00370 MTND2P39-201ENST00000457230 764 ntBASIC4.79□□□□□ -1.64
O00370 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.79□□□□□ -1.64
O00370 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.79□□□□□ -1.64
O00370 MTND6P6-201ENST00000478031 263 ntBASIC4.79□□□□□ -1.64
O00370 AC010627.1-201ENST00000503819 1294 ntBASIC4.79□□□□□ -1.64
O00370 AC113430.1-201ENST00000506872 718 ntBASIC4.79□□□□□ -1.64
O00370 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.79□□□□□ -1.64
O00370 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.79□□□□□ -1.64
O00370 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.79□□□□□ -1.64
O00370 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.79□□□□□ -1.64
O00370 PDCD5P1-201ENST00000543528 309 ntBASIC4.79□□□□□ -1.64
O00370 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.79□□□□□ -1.64
O00370 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.79□□□□□ -1.64
O00370 AC084783.1-201ENST00000565846 910 ntBASIC4.79□□□□□ -1.64
O00370 AP005119.2-201ENST00000579735 1105 ntBASIC4.79□□□□□ -1.64
O00370 AC069061.3-201ENST00000582254 823 ntBASIC4.79□□□□□ -1.64
O00370 HMGB2P1-201ENST00000591146 634 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms