Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC017104.4-201ENST00000636283 1592 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SLC28A1O00337 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC28A1O00337 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC28A1O00337 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SLC28A1O00337 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC28A1O00337 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC28A1O00337 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC28A1O00337 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC28A1O00337 MIR1178-201ENST00000408396 91 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 VTA1P1-201ENST00000414044 866 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC28A1O00337 TCEA1P4-201ENST00000415066 844 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 PNRC2P1-201ENST00000423940 420 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
SLC28A1O00337 CDY14P-201ENST00000431260 1014 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC28A1O00337 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC28A1O00337 AC074367.1-201ENST00000438685 1125 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 CDY12P-201ENST00000440679 1015 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 CDY13P-201ENST00000445813 1015 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 CDY23P-201ENST00000451661 1014 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC28A1O00337 DDX39BP2-208ENST00000453923 258 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC28A1O00337 AC018638.3-201ENST00000461273 132 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 RN7SL808P-201ENST00000496066 299 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SLC28A1O00337 MTND4LP2-201ENST00000502312 285 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC28A1O00337 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC28A1O00337 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC28A1O00337 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 SCARNA21.2-201ENST00000516600 166 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 AC008694.2-201ENST00000517591 306 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC28A1O00337 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC28A1O00337 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC28A1O00337 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC28A1O00337 DYNLL1P4-201ENST00000549314 266 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SLC28A1O00337 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC28A1O00337 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC28A1O00337 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC28A1O00337 AC090515.3-201ENST00000560431 315 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC28A1O00337 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC28A1O00337 AC079148.1-201ENST00000565944 819 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC28A1O00337 AC115085.1-201ENST00000588924 229 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC28A1O00337 AF230666.2-201ENST00000602328 725 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 AC090181.2-201ENST00000602975 672 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 AC010201.1-201ENST00000605051 540 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SLC28A1O00337 AC023509.5-201ENST00000617434 807 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC28A1O00337 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC28A1O00337 CR392039.4-201ENST00000624968 501 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC28A1O00337 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC28A1O00337 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC28A1O00337 LINC00622-201ENST00000562811 1570 ntBASIC4.35□□□□□ -1.71
SLC28A1O00337 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC28A1O00337 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC28A1O00337 CPHL1P-201ENST00000461341 3407 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 MFSD8-242ENST00000641690 4199 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SLC28A1O00337 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SLC28A1O00337 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SLC28A1O00337 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SLC28A1O00337 RNU1-108P-201ENST00000362556 161 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 RNA5SP307-201ENST00000362863 116 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SLC28A1O00337 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SLC28A1O00337 RNU6-98P-201ENST00000384173 107 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SLC28A1O00337 RNU2-72P-201ENST00000411175 163 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 MTATP6P19-201ENST00000413797 659 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SLC28A1O00337 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC28A1O00337 RNFT1P2-201ENST00000443064 757 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC28A1O00337 TPTE2P6-202ENST00000445572 1007 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 AC012671.1-201ENST00000451912 203 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC28A1O00337 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SLC28A1O00337 AC004453.1-201ENST00000487895 408 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 UBA52P3-201ENST00000491303 382 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.34□□□□□ -1.71
SLC28A1O00337 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC28A1O00337 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.34□□□□□ -1.71
SLC28A1O00337 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.34□□□□□ -1.71
SLC28A1O00337 AP000676.2-201ENST00000529711 301 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.34□□□□□ -1.71
SLC28A1O00337 AC068446.3-201ENST00000555285 382 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 GLRXP2-201ENST00000555594 321 ntBASIC4.34□□□□□ -1.71
SLC28A1O00337 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.34□□□□□ -1.71
SLC28A1O00337 AL121834.1-201ENST00000572284 509 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms