Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.62□□□□□ -1.67
CGB1A6NKQ9 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.62□□□□□ -1.67
CGB1A6NKQ9 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CGB1A6NKQ9 AL159169.3-201ENST00000608871 561 ntBASIC4.62□□□□□ -1.67
CGB1A6NKQ9 AC092266.1-201ENST00000610958 165 ntBASIC4.62□□□□□ -1.67
CGB1A6NKQ9 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CGB1A6NKQ9 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.62□□□□□ -1.67
CGB1A6NKQ9 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.62□□□□□ -1.67
CGB1A6NKQ9 AC099654.14-201ENST00000638599 341 ntBASIC4.62□□□□□ -1.67
CGB1A6NKQ9 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CGB1A6NKQ9 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CGB1A6NKQ9 PPBPP2-201ENST00000513150 1362 ntBASIC4.62□□□□□ -1.67
CGB1A6NKQ9 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CGB1A6NKQ9 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CGB1A6NKQ9 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CGB1A6NKQ9 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CGB1A6NKQ9 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.62□□□□□ -1.67
CGB1A6NKQ9 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.62□□□□□ -1.67
CGB1A6NKQ9 AC025470.1-201ENST00000510053 2032 ntBASIC4.62□□□□□ -1.67
CGB1A6NKQ9 ELF2P3-201ENST00000445099 1506 ntBASIC4.62□□□□□ -1.67
CGB1A6NKQ9 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AP004607.3-201ENST00000530354 3915 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 RNA5SP232-201ENST00000364144 119 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 RNU6-259P-201ENST00000383999 107 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC016739.1-201ENST00000405359 345 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 MIR1275-201ENST00000408770 80 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 RPS7P13-201ENST00000413955 498 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 ATG4AP1-201ENST00000416893 538 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 RNGTTP1-201ENST00000420965 728 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC073069.1-201ENST00000428657 441 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 YWHAEP5-201ENST00000431545 765 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AL353597.2-202ENST00000434901 373 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 B3GNT2P1-201ENST00000434960 952 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC112653.1-201ENST00000443851 386 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 MTCO1P48-201ENST00000448024 1096 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 MTND5P20-201ENST00000448677 143 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 RPS23P9-201ENST00000448848 438 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC093166.4-201ENST00000457867 318 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC104339.1-201ENST00000465478 348 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 TRBV8-2-201ENST00000475637 270 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 TMED11P-201ENST00000479478 690 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC041039.1-201ENST00000485656 536 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC092349.1-201ENST00000504903 310 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC105384.2-201ENST00000508433 640 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 ATP1B1P1-201ENST00000509767 915 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC104108.1-201ENST00000509930 412 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 PRMT5P1-201ENST00000514351 598 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 Y_RNA.702-201ENST00000516843 96 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 RNA5SP340-201ENST00000517132 107 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 IGKV2-36-201ENST00000519999 223 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 IGLV3-30-201ENST00000524362 298 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC092747.2-201ENST00000545069 983 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 RPA2P1-201ENST00000556557 721 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC009063.1-201ENST00000563342 702 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC009962.1-201ENST00000567327 3813 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 ZNF322P1-201ENST00000568013 1209 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC112230.1-201ENST00000604342 547 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 RNU4-89P-201ENST00000607443 133 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AL136131.3-201ENST00000607600 188 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 214.1 ms