Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 Y_RNA.51-201ENST00000362725 102 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 RNU6-932P-201ENST00000391108 106 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 Y_RNA.599-201ENST00000410489 109 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 BTF3P8-201ENST00000414577 526 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 GJA6P-201ENST00000415117 1042 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 AL133482.1-201ENST00000415988 498 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 RPF2P1-201ENST00000424137 906 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 HIGD1AP12-201ENST00000427832 281 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 MTND4P6-201ENST00000438297 472 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 PA2G4P6-201ENST00000438325 1197 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 RPL34P26-201ENST00000445636 354 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 HIGD1AP8-201ENST00000453927 274 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 AC091685.2-201ENST00000454924 864 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 GTF2IP12-201ENST00000456547 356 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 AL133477.1-201ENST00000457472 514 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 RPS4XP12-201ENST00000461747 709 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 RN7SL189P-201ENST00000468631 289 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 XKRY-201ENST00000510392 1100 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 RN7SKP141-201ENST00000516167 338 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 AC022360.1-201ENST00000521058 340 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 MTCO1P49-201ENST00000523429 802 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 AC011487.3-201ENST00000593607 453 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 MTND4P26-201ENST00000415971 1359 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC092079.1-201ENST00000558620 1985 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 FAM133CP-201ENST00000332869 704 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 RNU6-83P-201ENST00000384568 112 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 RNU6-178P-201ENST00000384631 104 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 NUDT19P3-201ENST00000404698 555 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 OR6K4P-201ENST00000423179 955 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 RPS3AP44-201ENST00000425466 790 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 PRELID3BP10-201ENST00000431957 584 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AL138878.2-201ENST00000440581 1241 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 RPL10P17-201ENST00000453852 316 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC244505.3-201ENST00000454598 187 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 RPL23AP44-201ENST00000482216 473 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC083982.1-201ENST00000485679 344 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 HMGN2P25-201ENST00000486956 268 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 IMPA1P1-201ENST00000510718 842 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC138832.1-201ENST00000522871 556 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 RFPL1S-203ENST00000539579 330 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 EDDM3DP-201ENST00000554692 434 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC027807.1-201ENST00000559921 996 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC009852.2-201ENST00000567898 485 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 DPRXP4-201ENST00000578053 568 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC005084.1-201ENST00000605160 304 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AP000255.1-201ENST00000610276 676 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AL356274.1-201ENST00000617064 410 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC005618.4-201ENST00000625053 554 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC023421.1-201ENST00000590535 1785 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms