Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 Y_RNA.142-201ENST00000363491 102 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 RNA5SP232-201ENST00000364144 119 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 PEX12P1-201ENST00000400284 1048 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AL096800.1-201ENST00000405326 893 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 MIR1302-11-201ENST00000408051 138 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 MIR1302-9-201ENST00000408365 138 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 SNORA11.3-201ENST00000408471 128 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 MIR1302-10-201ENST00000408734 138 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 MIR1275-201ENST00000408770 80 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AC073264.1-201ENST00000411508 416 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AMD1P2-201ENST00000412936 992 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 NPM1P34-201ENST00000428821 893 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 NANOGP6-201ENST00000429190 847 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AC109583.1-201ENST00000432156 268 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 ATP5HP2-201ENST00000433885 485 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AC009961.2-201ENST00000435771 251 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 OR6K1P-201ENST00000456766 971 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 RPL12P31-201ENST00000478433 450 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AC007182.2-201ENST00000489251 402 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AC106822.1-201ENST00000502647 526 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 RNA5SP206-201ENST00000516703 121 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 ARL2BPP2-201ENST00000550907 489 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AC087477.6-201ENST00000559595 843 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 MIR4310-201ENST00000582950 57 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 NRBF2P1-201ENST00000587407 859 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 BNIP3P10-201ENST00000605360 577 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 MIR1302-2-201ENST00000607096 138 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 SNORA11.6-201ENST00000619030 128 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 DDX18P4-201ENST00000511690 1966 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 AL033543.1-201ENST00000623440 13454 ntBASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.54□□□□□ -1.36
SALL4Q9UJQ4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 RNU1-49P-201ENST00000363468 159 ntBASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 RNA5SP485-201ENST00000365053 119 ntBASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 RNU6-1103P-201ENST00000384150 107 ntBASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 MIR506-201ENST00000384998 124 ntBASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 AL157702.1-201ENST00000398764 426 ntBASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 AL590004.1-201ENST00000405321 300 ntBASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 VN1R8P-201ENST00000407739 893 ntBASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 Y_RNA.608-201ENST00000410647 95 ntBASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 RPL21P50-201ENST00000417698 477 ntBASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 AC092634.6-201ENST00000418558 192 ntBASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 HMGB3P10-201ENST00000434734 572 ntBASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 COX4I1P2-201ENST00000447446 547 ntBASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 SNRPGP6-201ENST00000451124 220 ntBASIC6.53□□□□□ -1.36
SALL4Q9UJQ4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms