Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC068870.3-201ENST00000625077 2536 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 ICE2P1-201ENST00000512800 1849 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSU72Q9NP77 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSU72Q9NP77 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC004076.2-201ENST00000620532 3323 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSU72Q9NP77 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC006210.2-201ENST00000367074 1545 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC011416.1-201ENST00000514947 1732 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 AL161901.1-201ENST00000624954 3425 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC010894.1-201ENST00000313760 361 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 MIR133A2-201ENST00000347538 102 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 IGKV7-3-201ENST00000357453 298 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 SNORD56.2-201ENST00000363242 71 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 RNU6-809P-201ENST00000384461 107 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 AL596448.1-201ENST00000415024 392 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 RPL21P50-201ENST00000417698 477 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 PPIAP23-201ENST00000420099 497 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSU72Q9NP77 NPM1P34-201ENST00000428821 893 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 RPL7P4-203ENST00000430239 730 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 RPS7P5-201ENST00000441482 581 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 MTND4P19-201ENST00000446659 478 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 FGF7P4-201ENST00000509595 295 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 MTND5P4-201ENST00000514978 288 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 RNA5SP216-201ENST00000516111 123 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 RNU2-46P-201ENST00000517038 113 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 AL512310.1-201ENST00000548639 172 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 NMNAT1P1-201ENST00000554095 876 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 SNORD39.2-201ENST00000579995 76 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 RPL7AP69-201ENST00000595306 806 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC093788.1-201ENST00000609356 927 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC023509.5-201ENST00000617434 807 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC022400.9-201ENST00000623633 273 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC091905.1-201ENST00000624400 311 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 PISRT1-201ENST00000626175 531 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC110994.2-201ENST00000635481 492 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSU72Q9NP77 LINC00561-201ENST00000565815 2738 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSU72Q9NP77 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSU72Q9NP77 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSU72Q9NP77 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSU72Q9NP77 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSU72Q9NP77 AC114774.1-201ENST00000507410 1770 ntBASIC6.06□□□□□ -1.44
SSU72Q9NP77 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AC006378.2-201ENST00000623178 2476 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSU72Q9NP77 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSU72Q9NP77 RNU1-5P-201ENST00000362684 144 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 RNU6-1085P-201ENST00000363576 107 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 RNY4P34-201ENST00000364779 95 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 Y_RNA.326-201ENST00000365176 113 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSU72Q9NP77 Y_RNA.394-201ENST00000383942 103 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSU72Q9NP77 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 PTPN2P1-201ENST00000423212 1072 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 AL513185.2-201ENST00000425543 193 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AC099670.2-201ENST00000435130 321 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 CACYBPP1-201ENST00000438592 684 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 CXCR2P1-202ENST00000443392 1074 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms