Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC024220.1-201ENST00000603675 484 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC090948.2-201ENST00000607363 564 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 AL356863.1-201ENST00000623378 1080 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM4Q9C037 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM4Q9C037 AL121950.1-201ENST00000624993 2077 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
TRIM4Q9C037 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM4Q9C037 CDY3P-201ENST00000454543 1618 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM4Q9C037 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM4Q9C037 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRIM4Q9C037 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM4Q9C037 AL121657.1-201ENST00000327215 531 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 MIR208A-201ENST00000362287 71 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM4Q9C037 SNORA70C-201ENST00000384538 135 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM4Q9C037 CYCSP11-201ENST00000436426 315 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 HLA-N-201ENST00000437516 135 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 PPIAP17-201ENST00000438507 471 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 RPL23AP71-201ENST00000470966 469 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 RPS26P15-201ENST00000488067 348 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM4Q9C037 AC106872.2-201ENST00000494303 480 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM4Q9C037 IGHV3-63-201ENST00000518422 341 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM4Q9C037 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM4Q9C037 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM4Q9C037 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM4Q9C037 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM4Q9C037 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM4Q9C037 BNIP3P11-201ENST00000603878 563 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 AC110741.2-201ENST00000605278 268 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM4Q9C037 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM4Q9C037 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM4Q9C037 AC095050.2-201ENST00000510748 1458 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 AC018555.1-201ENST00000567548 1980 ntBASIC4.47□□□□□ -1.69
TRIM4Q9C037 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.46□□□□□ -1.69
TRIM4Q9C037 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TRIM4Q9C037 AL592148.3-201ENST00000608771 2646 ntBASIC4.46□□□□□ -1.69
TRIM4Q9C037 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
TRIM4Q9C037 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
TRIM4Q9C037 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM4Q9C037 AL031119.1-201ENST00000404707 1879 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 AC245100.2-201ENST00000454544 1679 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM4Q9C037 SNORD113.2-201ENST00000364166 89 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM4Q9C037 AL034379.1-201ENST00000423216 253 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 RPL7AP25-201ENST00000423357 805 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 Z74021.1-201ENST00000423610 407 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 RPSAP41-201ENST00000439695 860 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 AC104651.2-201ENST00000447549 528 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 AP002812.1-201ENST00000495378 474 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 SCARNA22-201ENST00000503991 125 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM4Q9C037 AC091868.1-201ENST00000508746 304 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 RNU2-30P-201ENST00000516209 141 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 MIR2114-201ENST00000516645 80 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 IGHV3-32-201ENST00000519182 355 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 AC018442.3-201ENST00000523025 183 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
TRIM4Q9C037 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM4Q9C037 AC006130.2-201ENST00000586202 326 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM4Q9C037 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM4Q9C037 AC112200.1-201ENST00000625015 234 ntBASIC4.46□□□□□ -1.7
TRIM4Q9C037 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM4Q9C037 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TRIM4Q9C037 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM4Q9C037 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TRIM4Q9C037 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TRIM4Q9C037 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TRIM4Q9C037 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM4Q9C037 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM4Q9C037 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM4Q9C037 NCLP2-201ENST00000416078 1462 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM4Q9C037 AC067945.1-201ENST00000342609 618 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 RN7SKP44-201ENST00000363602 316 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.45□□□□□ -1.7
TRIM4Q9C037 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM4Q9C037 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TRIM4Q9C037 RNA5SP44-201ENST00000410446 133 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 JKAMPP1-201ENST00000413804 919 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 RAD23BP1-201ENST00000421404 1227 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM4Q9C037 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM4Q9C037 AC016831.4-201ENST00000438302 307 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms