Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 MTND2P21-201ENST00000436242 1042 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AF228730.2-201ENST00000438784 848 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 ABCF2P2-201ENST00000450549 296 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AC099560.2-201ENST00000457554 255 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 OR9N1P-202ENST00000494289 481 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AC092851.1-201ENST00000535964 478 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AC008033.2-201ENST00000542626 177 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AC009101.1-201ENST00000568135 242 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 SNORD39.2-201ENST00000579995 76 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AL450270.1-201ENST00000606160 391 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AL135786.2-201ENST00000608422 615 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AC005021.1-201ENST00000608730 355 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AL096803.3-201ENST00000609032 532 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 MIR6861-201ENST00000618657 64 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AL445493.3-201ENST00000619568 477 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 MIR6715B-201ENST00000637172 77 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 ZNF137P-201ENST00000456718 1920 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 AC006971.1-201ENST00000407916 4486 ntBASIC4.33□□□□□ -1.72
CCDC28BQ9BUN5 MAPK10-263ENST00000641052 4307 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC108467.2-201ENST00000617640 1597 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC009501.3-201ENST00000605001 1352 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 U8.4-201ENST00000363626 134 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 RNU4-4P-201ENST00000364588 130 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 RNU6-609P-201ENST00000365459 107 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 RANP4-201ENST00000413361 655 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC093162.1-201ENST00000419682 124 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 OR6K4P-201ENST00000423179 955 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC093698.1-201ENST00000423843 571 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AL513321.1-201ENST00000441175 761 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC006326.1-201ENST00000445465 787 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AL627224.1-201ENST00000448334 444 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 OR1H1P-201ENST00000448731 937 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 NDUFS5P3-201ENST00000450668 321 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 EIF4A1P11-201ENST00000451239 222 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 RN7SL727P-201ENST00000482164 296 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC104629.1-201ENST00000494226 508 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 BTF3P13-201ENST00000513224 490 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 RNU2-30P-201ENST00000516209 141 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 MIR3691-201ENST00000578066 90 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC135178.6-201ENST00000605314 398 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC015849.2-201ENST00000605738 409 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC242628.1-201ENST00000606810 391 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AL645927.2-201ENST00000618350 349 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC019278.1-201ENST00000623516 479 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AC106858.1-201ENST00000637497 429 ntBASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CCDC28BQ9BUN5 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AL445437.1-201ENST00000623157 3087 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AL133412.1-201ENST00000380194 2992 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AL391361.1-201ENST00000405580 489 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AL121882.1-201ENST00000422893 417 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AL158073.1-201ENST00000426848 1104 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AC016831.4-201ENST00000438302 307 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AC073850.1-201ENST00000449243 255 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 MTND6P32-201ENST00000457611 483 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 RN7SL174P-201ENST00000475578 289 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 HMGB1P3-201ENST00000502802 616 ntBASIC4.31□□□□□ -1.72
CCDC28BQ9BUN5 AC010468.3-201ENST00000508225 458 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms