Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC092641.1-201ENST00000440229 772 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 CNOT7P2-201ENST00000441051 832 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 CASP3P1-201ENST00000446037 609 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 SETP11-201ENST00000473027 690 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 RPS21P4-201ENST00000487122 248 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 DSTNP2-201ENST00000504533 515 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC024558.1-201ENST00000505008 528 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC112198.1-201ENST00000505369 1220 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 HSPE1P23-201ENST00000509838 286 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC012414.6-201ENST00000568241 401 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC002400.1-201ENST00000569310 726 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 ROCK1P1-201ENST00000573767 549 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC022662.1-201ENST00000580252 331 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 RN7SL356P-201ENST00000582228 248 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC090181.2-201ENST00000602975 672 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC091946.2-201ENST00000606105 291 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC128687.2-201ENST00000609657 566 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC107075.1-201ENST00000613695 314 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AL121839.2-201ENST00000565058 6943 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC079097.1-201ENST00000512187 1399 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC087359.1-201ENST00000508335 1740 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 MIR223-201ENST00000385204 110 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC005522.1-201ENST00000395416 346 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 CHMP1B2P-201ENST00000399581 597 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC136624.1-201ENST00000400791 413 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AL133388.1-201ENST00000404509 287 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AL356968.2-201ENST00000412769 1257 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 YWHAZP7-201ENST00000436906 631 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC073465.2-201ENST00000440938 498 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 USP9YP29-201ENST00000445112 563 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AL606662.1-201ENST00000445763 553 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC114755.5-201ENST00000447760 831 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC093392.2-201ENST00000450682 337 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 SUMO2P2-201ENST00000456482 255 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 CFTRP1-201ENST00000456646 183 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC107015.1-201ENST00000466902 747 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC092754.1-201ENST00000472975 479 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 RPL30P6-201ENST00000475925 342 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC096751.1-202ENST00000502691 1067 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC025881.1-201ENST00000518851 512 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 HIGD1AP17-201ENST00000554576 276 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 CENPUP2-201ENST00000555897 1186 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC087465.1-201ENST00000560574 245 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms