Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ELOCP15-201ENST00000442090 332 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AL035551.1-201ENST00000446931 348 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC009963.2-201ENST00000453431 138 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC053481.1-201ENST00000467217 306 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 RN7SL459P-201ENST00000481078 302 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 RN7SL809P-201ENST00000482040 297 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC139783.2-201ENST00000504847 1145 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC107918.3-201ENST00000533272 382 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 SNX6P1-201ENST00000601728 1224 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC005034.4-201ENST00000603612 899 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AL035461.2-201ENST00000619201 524 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AP003499.2-201ENST00000624100 483 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 AP002967.1-201ENST00000624203 539 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL21A1Q96P44 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL21A1Q96P44 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL21A1Q96P44 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL21A1Q96P44 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL21A1Q96P44 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 AL445437.1-201ENST00000623157 3087 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC087565.3-202ENST00000642085 1603 ntBASIC4.09□□□□□ -1.76
COL21A1Q96P44 AC025031.4-201ENST00000621248 3271 ntBASIC4.09□□□□□ -1.76
COL21A1Q96P44 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.76
COL21A1Q96P44 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.09□□□□□ -1.76
COL21A1Q96P44 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
COL21A1Q96P44 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.08□□□□□ -1.76
COL21A1Q96P44 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
COL21A1Q96P44 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
COL21A1Q96P44 RNA5SP447-201ENST00000363749 119 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 RNU6-1251P-201ENST00000364502 107 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL21A1Q96P44 MIR3065-201ENST00000390137 79 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 AL356967.1-201ENST00000406305 431 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 RPL23AP48-201ENST00000406913 488 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL21A1Q96P44 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.08□□□□□ -1.76
COL21A1Q96P44 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.08□□□□□ -1.76
COL21A1Q96P44 TMSB10P2-201ENST00000416049 131 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL21A1Q96P44 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL21A1Q96P44 OR6K4P-201ENST00000423179 955 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.08□□□□□ -1.76
COL21A1Q96P44 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.08□□□□□ -1.76
COL21A1Q96P44 RPL31P20-201ENST00000449593 360 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 Z95152.1-201ENST00000453556 656 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 AC069277.2-201ENST00000454211 432 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 RN7SL812P-201ENST00000493791 279 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL21A1Q96P44 snoU109.6-201ENST00000516831 118 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 IGLVIV-65-201ENST00000517313 360 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.08□□□□□ -1.76
COL21A1Q96P44 NPM1P6-201ENST00000521088 871 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 AC090281.1-201ENST00000523019 276 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 PHBP17-201ENST00000528576 541 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.08□□□□□ -1.76
COL21A1Q96P44 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL21A1Q96P44 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.08□□□□□ -1.76
COL21A1Q96P44 MIR5096-201ENST00000583713 70 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.08□□□□□ -1.76
COL21A1Q96P44 AF230666.2-201ENST00000602328 725 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 AC005191.1-201ENST00000603950 358 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 AC008745.1-201ENST00000604064 271 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 AC023813.4-201ENST00000607580 580 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.08□□□□□ -1.76
COL21A1Q96P44 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.08□□□□□ -1.76
COL21A1Q96P44 MIR6891-201ENST00000618788 93 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 AL133370.2-201ENST00000619934 439 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 AC010435.1-201ENST00000623353 1177 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 AC016588.2-201ENST00000632484 3021 ntBASIC4.08□□□□□ -1.76
COL21A1Q96P44 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.08□□□□□ -1.76
COL21A1Q96P44 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
COL21A1Q96P44 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL21A1Q96P44 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL21A1Q96P44 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL21A1Q96P44 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
COL21A1Q96P44 RNU1-130P-201ENST00000363930 160 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms