Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RNA5SP34-201ENST00000516887 130 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 OR10G5P-201ENST00000532733 358 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 HAUS8P1-201ENST00000549005 542 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 AC087477.6-201ENST00000559595 843 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 AC124283.4-201ENST00000581815 456 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 EIF1P5-201ENST00000585002 234 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTP4A1Q93096 VN1R88P-201ENST00000596787 292 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 SNX18P1Y-201ENST00000616231 511 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 AC020923.1-201ENST00000624021 917 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTP4A1Q93096 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTP4A1Q93096 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTP4A1Q93096 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTP4A1Q93096 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.4□□□□□ -1.7
PTP4A1Q93096 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTP4A1Q93096 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
PTP4A1Q93096 AC068254.2-201ENST00000623938 3577 ntBASIC4.4□□□□□ -1.7
PTP4A1Q93096 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PTP4A1Q93096 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
PTP4A1Q93096 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.4□□□□□ -1.7
PTP4A1Q93096 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTP4A1Q93096 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PTP4A1Q93096 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTP4A1Q93096 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTP4A1Q93096 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
PTP4A1Q93096 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTP4A1Q93096 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTP4A1Q93096 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 RN7SKP44-201ENST00000363602 316 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 SNORA70E-201ENST00000384492 135 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 SNORA66-201ENST00000384792 133 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 MIR323B-201ENST00000385269 82 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PTP4A1Q93096 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTP4A1Q93096 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PTP4A1Q93096 RPS15AP40-201ENST00000419621 391 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 AP001324.1-201ENST00000428553 399 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 AC002542.1-201ENST00000440683 193 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 ARL4AP3-201ENST00000441452 574 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 AURKAPS1-201ENST00000451805 1212 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 SNORD108-201ENST00000459332 71 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 RPS26P39-201ENST00000469206 341 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 RN7SL629P-201ENST00000489622 285 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 RN7SL244P-201ENST00000493405 297 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 STMN1P2-201ENST00000508435 439 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 RNA5SP92-201ENST00000516437 110 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 AL136520.1-202ENST00000555494 763 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 AL121612.2-201ENST00000612261 482 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 MIR8084-201ENST00000614105 89 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 AL669942.2-201ENST00000620352 697 ntBASIC4.4□□□□□ -1.71
PTP4A1Q93096 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PTP4A1Q93096 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTP4A1Q93096 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTP4A1Q93096 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTP4A1Q93096 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PTP4A1Q93096 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 AC073055.1-201ENST00000456901 1621 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 MTCO1P4-201ENST00000520516 1409 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTP4A1Q93096 AL132640.2-201ENST00000559968 1698 ntBASIC4.39□□□□□ -1.71
PTP4A1Q93096 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.39□□□□□ -1.71
PTP4A1Q93096 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms