Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 AC109635.6-201ENST00000525487 1113 ntBASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 OR5AN2P-201ENST00000534535 896 ntBASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 AL354984.3-201ENST00000604803 325 ntBASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 AL021997.2-201ENST00000615674 271 ntBASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 MIR6730-201ENST00000622213 67 ntBASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 MIR4727-201ENST00000622232 55 ntBASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 AC009452.1-201ENST00000640823 606 ntBASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
ZNF439Q8NDP4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 AC016588.2-201ENST00000632484 3021 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 MIR331-201ENST00000362302 94 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 RNA5SP513-201ENST00000364648 118 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 RNA5SP332-201ENST00000391063 115 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 CYB5AP4-201ENST00000396692 399 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 SNORA11F-201ENST00000408237 128 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 RPS23P10-201ENST00000416185 486 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 EXTL2P1-201ENST00000446218 416 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 AC104164.2-201ENST00000496953 495 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 AK3P4-201ENST00000504283 583 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 HNRNPKP5-201ENST00000515300 253 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 RN7SKP92-201ENST00000517266 244 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 OR8X1P-201ENST00000534542 869 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 AC137768.1-201ENST00000549998 553 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 AC068790.5-201ENST00000602741 355 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 AC093765.1-201ENST00000603758 881 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 AC113403.1-201ENST00000604910 193 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 uc_338.13-201ENST00000618243 179 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 AC002044.3-201ENST00000623314 541 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 AC012618.3-205ENST00000637896 1496 ntBASIC3.54□□□□□ -1.84
ZNF439Q8NDP4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AL137100.1-201ENST00000556703 1620 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 RNA5SP175-201ENST00000364275 119 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 MIR192-201ENST00000384915 110 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 RNA5SP105-201ENST00000391123 113 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 RBMY1KP-201ENST00000423480 476 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AL132765.1-201ENST00000434165 553 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 RPL7P28-201ENST00000437739 740 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AC092013.1-201ENST00000438795 332 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 RPL7P22-201ENST00000466005 733 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AC092045.1-201ENST00000495716 1231 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AC108145.1-201ENST00000503770 153 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 RNU6-347P-201ENST00000516658 105 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 IGLVIV-53-201ENST00000520107 367 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms