Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL034374.1-201ENST00000406329 351 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 RNU4-25P-201ENST00000410569 230 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AL357078.2-201ENST00000416486 427 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AC073464.3-201ENST00000422564 712 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AC023141.6-201ENST00000429418 337 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AC022022.1-201ENST00000430304 178 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 RPEP2-201ENST00000432149 701 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AL133244.1-201ENST00000456007 258 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 CABYRP1-201ENST00000465493 1045 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AC021205.1-201ENST00000468797 348 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AC090013.1-201ENST00000485147 480 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 SUMO1P1-201ENST00000497904 306 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 HAUS1P1-201ENST00000505275 832 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 OR51K1P-201ENST00000510214 950 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AC005242.1-201ENST00000585658 438 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AC113403.1-201ENST00000604910 193 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AL096803.3-201ENST00000609032 532 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 MIR378J-201ENST00000611988 109 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AC025016.1-201ENST00000616746 682 ntBASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
C9orf40Q8IXQ3 AC139713.2-215ENST00000641428 5037 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 FAM3C2-201ENST00000312214 681 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC097374.1-203ENST00000400783 485 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 OR51A6P-201ENST00000418680 1004 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 RPS29P17-201ENST00000430795 166 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 RPS3AP54-201ENST00000435535 734 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 CACYBPP1-201ENST00000438592 684 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 RPL23AP52-201ENST00000439311 478 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC007000.2-201ENST00000442564 487 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 RPL7P33-201ENST00000444159 742 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 RPL7P32-201ENST00000457119 744 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC092691.2-201ENST00000461787 803 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 RPL23AP65-201ENST00000475608 468 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 ATP1B1P1-201ENST00000509767 915 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC093840.1-201ENST00000511599 336 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC090151.1-201ENST00000520784 730 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 OR5BC1P-201ENST00000529327 739 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC027176.2-201ENST00000559166 746 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 ATP5J2P6-201ENST00000565203 266 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC021483.2-201ENST00000567415 758 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 RPL23AP97-201ENST00000568955 471 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AL353726.1-201ENST00000614041 1000 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 uc_338.13-201ENST00000618243 179 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 NEAT1-202ENST00000501122 22743 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 AC005332.5-201ENST00000591222 2919 ntBASIC4.06□□□□□ -1.76
C9orf40Q8IXQ3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms