Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 RPS16P5-201ENST00000406501 404 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 NIPA2P1-201ENST00000426223 976 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 UBE2V1P6-201ENST00000430840 422 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AC092162.1-201ENST00000432828 434 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AL445433.1-201ENST00000457507 257 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AC108751.2-201ENST00000469993 231 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 UBA52P3-201ENST00000491303 382 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AC008897.1-201ENST00000494006 347 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 CEACAMP10-202ENST00000495431 496 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 PPM1AP1-201ENST00000502740 1135 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AC121161.1-201ENST00000510606 652 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AP000916.1-201ENST00000533869 835 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AC092451.2-201ENST00000538746 658 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AP003717.3-201ENST00000544832 1180 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AL049839.1-201ENST00000556151 657 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AC079075.1-201ENST00000559543 878 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 OR2BH1P-201ENST00000608850 864 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AL669942.2-201ENST00000620352 697 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AP003072.4-201ENST00000624580 310 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 CDRT1-208ENST00000630868 794 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 MFSD8-213ENST00000641134 1327 ntBASIC4.94□□□□□ -1.62
PRPF39Q86UA1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 AC134882.1-201ENST00000603738 1676 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 MIR298-201ENST00000401212 88 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 DDX18P3-201ENST00000404856 2007 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 FAR2P2-201ENST00000413041 594 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 BX664727.1-201ENST00000416024 466 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 E2F6P2-201ENST00000420708 748 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 FAR2P4-202ENST00000425399 584 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 ELOCP11-201ENST00000436690 332 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 ELOCP16-201ENST00000444494 332 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 YWHAQP9-201ENST00000445891 512 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 AC234781.3-201ENST00000452540 973 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 RWDD4P1-201ENST00000488019 565 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 AC008565.1-201ENST00000509046 885 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 Y_RNA.719-201ENST00000517156 106 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 ATP5F1P7-201ENST00000567330 760 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 AC234771.5-201ENST00000600161 514 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 AC007497.1-201ENST00000610421 561 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 MIR6780A-201ENST00000615089 68 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 uc_338.18-201ENST00000615451 175 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 AC015804.1-201ENST00000622935 435 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 AC016717.3-201ENST00000624730 554 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 MAPK10-349ENST00000641767 3661 ntBASIC4.93□□□□□ -1.62
PRPF39Q86UA1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PRPF39Q86UA1 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AL031119.1-201ENST00000404707 1879 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PRPF39Q86UA1 ENSAP3-201ENST00000312710 333 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 RNA5SP191-201ENST00000362585 102 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 AP002784.2-201ENST00000397300 549 ntBASIC4.92□□□□□ -1.62
PRPF39Q86UA1 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms