Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RN7SL369P-201ENST00000477138 299 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC073522.1-201ENST00000483312 377 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC090096.1-201ENST00000489168 390 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 NPM1P21-201ENST00000513394 762 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC108064.1-201ENST00000513791 460 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 SNORA81.2-201ENST00000516868 170 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 RNA5SP400-201ENST00000517155 111 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC107958.1-201ENST00000556576 290 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC008638.3-201ENST00000603341 463 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC245014.2-201ENST00000603689 287 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC016925.2-201ENST00000605108 242 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC246785.4-201ENST00000605374 287 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC005332.6-201ENST00000613178 446 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 MIR6806-201ENST00000622141 64 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC111152.1-202ENST00000635848 339 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 SHQ1P1-201ENST00000437111 1544 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.71□□□□□ -1.49
ATG4DQ86TL0 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
ATG4DQ86TL0 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.71□□□□□ -1.49
ATG4DQ86TL0 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
ATG4DQ86TL0 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ATG4DQ86TL0 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ATG4DQ86TL0 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.71□□□□□ -1.49
ATG4DQ86TL0 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
ATG4DQ86TL0 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
ATG4DQ86TL0 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
ATG4DQ86TL0 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ATG4DQ86TL0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC119674.1-202ENST00000641333 1860 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 RN7SKP237-201ENST00000364663 301 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 PEX12P1-201ENST00000400284 1048 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 RPL23AP47-201ENST00000408017 460 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 SNORA11.3-201ENST00000408471 128 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC113618.1-201ENST00000416747 285 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC004690.1-201ENST00000418216 328 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 RAD23BP1-201ENST00000421404 1227 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 OR2B7P-201ENST00000429302 934 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 MORF4-201ENST00000447135 971 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AL163540.1-201ENST00000485382 386 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 GM2AP2-201ENST00000491764 562 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 RNU6-416P-201ENST00000516265 103 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 RNU6-1308P-201ENST00000516817 103 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC027026.1-201ENST00000532323 742 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC027229.1-201ENST00000583887 253 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC125494.2-201ENST00000602431 657 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC115286.1-201ENST00000604298 434 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 SNORA74.4-201ENST00000607595 199 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 uc_338.5-201ENST00000611839 155 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC068722.2-201ENST00000618734 544 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 SNORA11.6-201ENST00000619030 128 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC092650.2-201ENST00000619984 902 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AL122023.1-201ENST00000622847 530 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC024023.1-201ENST00000624530 922 ntBASIC5.71□□□□□ -1.5
ATG4DQ86TL0 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 NSRP1P1-201ENST00000444067 1693 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms