Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MIR1911-201ENST00000410783 80 ntBASIC3.2□□□□□ -1.9
VPS13CQ709C8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 PDSS1P2-201ENST00000449397 678 ntBASIC3.2□□□□□ -1.9
VPS13CQ709C8 RN7SL271P-201ENST00000487601 295 ntBASIC3.2□□□□□ -1.9
VPS13CQ709C8 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 AC119674.1-212ENST00000641155 993 ntBASIC3.2□□□□□ -1.9
VPS13CQ709C8 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13CQ709C8 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13CQ709C8 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13CQ709C8 AC006058.1-201ENST00000568686 5067 ntBASIC3.19□□□□□ -1.9
VPS13CQ709C8 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13CQ709C8 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 AC087369.1-201ENST00000520775 996 ntBASIC3.19□□□□□ -1.9
VPS13CQ709C8 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13CQ709C8 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13CQ709C8 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13CQ709C8 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13CQ709C8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13CQ709C8 RPL7P44-201ENST00000424827 742 ntBASIC3.19□□□□□ -1.9
VPS13CQ709C8 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 RPL7P23-201ENST00000493874 747 ntBASIC3.19□□□□□ -1.9
VPS13CQ709C8 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 AP000473.2-201ENST00000602659 1537 ntBASIC3.19□□□□□ -1.9
VPS13CQ709C8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13CQ709C8 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13CQ709C8 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13CQ709C8 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 AP003122.5-201ENST00000527668 3766 ntBASIC3.19□□□□□ -1.9
VPS13CQ709C8 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13CQ709C8 AP001273.1-201ENST00000624493 3152 ntBASIC3.19□□□□□ -1.9
VPS13CQ709C8 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13CQ709C8 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS13CQ709C8 AL133268.1-201ENST00000405676 1401 ntBASIC3.19□□□□□ -1.9
VPS13CQ709C8 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.19□□□□□ -1.9
VPS13CQ709C8 AC017079.2-201ENST00000416102 485 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 RPL38P1-201ENST00000460914 211 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 RPS27AP1-201ENST00000475545 471 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 MIR4672-201ENST00000583126 81 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 AC091905.2-201ENST00000623143 306 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 CR392039.4-201ENST00000624968 501 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13CQ709C8 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13CQ709C8 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13CQ709C8 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13CQ709C8 RBMY1KP-201ENST00000423480 476 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 RPL21P10-201ENST00000463521 490 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 RPL29P14-201ENST00000495837 428 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13CQ709C8 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13CQ709C8 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13CQ709C8 AL442128.2-201ENST00000620246 1824 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 ANKRD36P1-201ENST00000344424 659 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 AJ239321.1-201ENST00000424255 564 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 RAD23BP3-201ENST00000454157 1152 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 RN7SL809P-201ENST00000482040 297 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 AC136601.2-201ENST00000604356 474 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 RNA5SP439-201ENST00000617595 124 ntBASIC3.18□□□□□ -1.9
VPS13CQ709C8 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13CQ709C8 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13CQ709C8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
VPS13CQ709C8 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13CQ709C8 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13CQ709C8 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms