Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL445423.1-201ENST00000609941 536 ntBASIC4.4□□□□□ -1.71
PTPN20Q4JDL3 AC008785.1-201ENST00000624475 456 ntBASIC4.4□□□□□ -1.71
PTPN20Q4JDL3 AC027290.2-201ENST00000623210 18662 ntBASIC4.4□□□□□ -1.71
PTPN20Q4JDL3 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.4□□□□□ -1.71
PTPN20Q4JDL3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN20Q4JDL3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN20Q4JDL3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN20Q4JDL3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN20Q4JDL3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AC092162.3-201ENST00000624511 1624 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 RNA5SP52-201ENST00000362448 134 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 RNU1-94P-201ENST00000362627 173 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AC093719.1-202ENST00000392735 373 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 OR6C69P-201ENST00000394268 893 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AP000357.1-201ENST00000409926 1165 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AC099336.2-201ENST00000422457 254 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AC099560.2-201ENST00000457554 255 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AC109635.6-201ENST00000525487 1113 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 OR7E10P-201ENST00000526420 991 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 CYCSP29-201ENST00000533731 318 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AC007599.1-201ENST00000568688 1174 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 KPNA2P3-201ENST00000584190 848 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 SNORA35B-201ENST00000607417 129 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AL023583.1-201ENST00000607518 1143 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AL136295.6-201ENST00000610486 658 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 MIR7151-201ENST00000617477 60 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AC009704.2-201ENST00000618739 483 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AL445567.2-201ENST00000618935 498 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 AC010435.1-201ENST00000623353 1177 ntBASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN20Q4JDL3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 SNORA37-201ENST00000384504 129 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AL035696.2-201ENST00000407941 709 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 EIF4A1P3-201ENST00000411521 244 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 GTF2IP2-201ENST00000424290 697 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 RPS26P47-201ENST00000427219 348 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 RPL23AP46-201ENST00000438548 490 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AC009220.1-201ENST00000451614 275 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 RPL7AP28-201ENST00000464513 571 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 RN7SL585P-201ENST00000470538 280 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 RN7SL481P-201ENST00000477764 299 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AC006517.1-201ENST00000480485 328 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AC105137.1-201ENST00000484355 562 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AC025554.1-201ENST00000505641 188 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AC113398.2-201ENST00000507630 558 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AC106806.2-201ENST00000509365 500 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 PARP4P3-201ENST00000510265 317 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 KRT19P6-201ENST00000510983 209 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AC023575.1-201ENST00000580510 358 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 IPO5P1-202ENST00000600039 287 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 ARF4P1-201ENST00000605447 541 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AC005962.2-201ENST00000611427 652 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AC015922.4-201ENST00000612568 690 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 LINC00901.1-201ENST00000617252 152 ntBASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPN20Q4JDL3 MIR7702-201ENST00000621931 59 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms