Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AC068620.4-201ENST00000636730 1182 ntBASIC5.44□□□□□ -1.54
TRIM71Q2Q1W2 AP003399.1-201ENST00000637534 361 ntBASIC5.44□□□□□ -1.54
TRIM71Q2Q1W2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM71Q2Q1W2 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM71Q2Q1W2 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 RN7SKP145-201ENST00000363291 303 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 SNORA48.4-201ENST00000391089 134 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 MIR298-201ENST00000401212 88 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AL449283.1-202ENST00000418249 604 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 RPL7P29-201ENST00000437151 728 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 NPM1P33-201ENST00000438918 872 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AL450023.3-201ENST00000440592 271 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 ARL5AP2-201ENST00000444698 533 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AL358794.1-201ENST00000445689 381 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC023271.1-201ENST00000445936 1090 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 TPT1P12-201ENST00000448968 492 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC096992.1-201ENST00000459808 709 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 SCARNA22-201ENST00000503991 125 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC092709.1-201ENST00000521355 1045 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC104417.1-201ENST00000523974 751 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 OR10V3P-201ENST00000525712 725 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 OR5M2P-201ENST00000529003 936 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC006518.2-201ENST00000542513 940 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AL132857.1-201ENST00000555180 708 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC095057.3-201ENST00000567102 1157 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 ZNF92P3-201ENST00000596594 954 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC125494.3-201ENST00000602759 455 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC106052.1-201ENST00000608029 497 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AL121890.3-201ENST00000618494 516 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 MIR6853-201ENST00000619642 74 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC004232.3-201ENST00000622977 525 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AC073055.1-201ENST00000456901 1621 ntBASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM71Q2Q1W2 HSPA8P17-201ENST00000427029 1382 ntBASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 ECM1P2-201ENST00000503354 1577 ntBASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 SNORA70F-201ENST00000384142 135 ntBASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 RNU6-225P-201ENST00000384613 103 ntBASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 MIR525-201ENST00000384978 85 ntBASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 U3.30-201ENST00000391308 210 ntBASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 AL356967.1-201ENST00000406305 431 ntBASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 XKRYP1-201ENST00000423438 492 ntBASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 XKRYP2-201ENST00000432915 492 ntBASIC5.42□□□□□ -1.54
TRIM71Q2Q1W2 AL592437.1-201ENST00000443781 492 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms