Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MAPK10-372ENST00000641954 3413 ntBASIC3.33□□□□□ -1.88
HIST1H1AQ02539 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 EXOC5P1-201ENST00000510543 1969 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 AL139811.1-201ENST00000424779 2299 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 MT-RNR1-201ENST00000389680 954 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 RPS26P13-201ENST00000419030 330 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 ARAFP1-201ENST00000422172 605 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 OR6K4P-201ENST00000423179 955 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 AC006455.6-201ENST00000426192 893 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 BMS1P19-201ENST00000433925 393 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 AL049745.1-201ENST00000433953 286 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 SEPT7P6-201ENST00000469999 1143 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 SNORA70.14-201ENST00000516205 110 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 AP001781.1-201ENST00000530977 207 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 AC008147.3-201ENST00000548666 354 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 MIR4716-201ENST00000579628 84 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 MIR4270-201ENST00000581799 70 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 AC083899.3-201ENST00000603413 594 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 OR2L1P-202ENST00000641567 1023 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 AC092162.3-201ENST00000624511 1624 ntBASIC3.32□□□□□ -1.88
HIST1H1AQ02539 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HIST1H1AQ02539 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 HSPA8P1-201ENST00000425843 1833 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 RN7SKP103-201ENST00000363848 320 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 AL589994.1-201ENST00000404962 340 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 RPL23AP26-201ENST00000412728 464 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 RBMY1KP-201ENST00000423480 476 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 RPL23AP43-201ENST00000446445 471 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 AL162591.2-201ENST00000449634 317 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 AC087385.1-201ENST00000475062 312 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 RNA5SP309-201ENST00000516670 106 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 AC069061.3-201ENST00000582254 823 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 NPM1P45-201ENST00000583151 559 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 FAM25E-202ENST00000608562 189 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 AP005019.3-201ENST00000620418 560 ntBASIC3.31□□□□□ -1.88
HIST1H1AQ02539 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HIST1H1AQ02539 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AC007342.7-201ENST00000624610 2337 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 MIR423-201ENST00000362201 94 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 RNA5SP388-201ENST00000362584 119 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 RNU1-87P-201ENST00000363727 170 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 MIR659-201ENST00000384963 97 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 RNA5SP397-201ENST00000391323 118 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST1H1AQ02539 RHEBP3-201ENST00000411920 351 ntBASIC3.3□□□□□ -1.88
HIST1H1AQ02539 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms