Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
CX3CL1P78423 RPF2P1-201ENST00000424137 906 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.11□□□□□ -1.75
CX3CL1P78423 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 MOB1AP1-201ENST00000430903 535 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CL1P78423 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.11□□□□□ -1.75
CX3CL1P78423 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.11□□□□□ -1.75
CX3CL1P78423 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 EEF1A1P1-201ENST00000447052 739 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.11□□□□□ -1.75
CX3CL1P78423 RHEBP2-201ENST00000450289 600 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CL1P78423 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CL1P78423 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 COPS8P2-201ENST00000473228 627 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.11□□□□□ -1.75
CX3CL1P78423 RN7SL30P-201ENST00000488416 306 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 UBA52P3-201ENST00000491303 382 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 NIFKP7-201ENST00000503365 834 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.11□□□□□ -1.75
CX3CL1P78423 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 RN7SKP46-201ENST00000515942 234 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.11□□□□□ -1.75
CX3CL1P78423 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.11□□□□□ -1.75
CX3CL1P78423 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.11□□□□□ -1.75
CX3CL1P78423 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.11□□□□□ -1.75
CX3CL1P78423 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CL1P78423 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CL1P78423 OR7E128P-201ENST00000532736 1024 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.11□□□□□ -1.75
CX3CL1P78423 AC024940.3-201ENST00000538551 316 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.11□□□□□ -1.75
CX3CL1P78423 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.11□□□□□ -1.75
CX3CL1P78423 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.11□□□□□ -1.75
CX3CL1P78423 AC004217.3-201ENST00000551552 878 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.11□□□□□ -1.75
CX3CL1P78423 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.11□□□□□ -1.75
CX3CL1P78423 MIR4489-201ENST00000578869 62 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 AC011840.5-201ENST00000582125 771 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 AC015688.2-201ENST00000584523 262 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.11□□□□□ -1.75
CX3CL1P78423 AC091488.1-201ENST00000604239 660 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CL1P78423 AC099676.1-201ENST00000608886 657 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 AL158163.2-201ENST00000619110 700 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 AP002505.2-201ENST00000623585 696 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CL1P78423 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CL1P78423 AC087821.2-201ENST00000637086 450 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 LINC02211-204ENST00000642024 1070 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CL1P78423 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CL1P78423 AC083843.3-201ENST00000623679 2186 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CL1P78423 AL118496.1-201ENST00000440201 1812 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CX3CL1P78423 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CX3CL1P78423 MFSD8-220ENST00000641243 1422 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CX3CL1P78423 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.11□□□□□ -1.75
CX3CL1P78423 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CX3CL1P78423 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CL1P78423 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.1□□□□□ -1.75
CX3CL1P78423 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CL1P78423 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.1□□□□□ -1.75
CX3CL1P78423 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.1□□□□□ -1.75
CX3CL1P78423 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.1□□□□□ -1.75
CX3CL1P78423 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CX3CL1P78423 SNORA17.1-201ENST00000362945 126 ntBASIC4.1□□□□□ -1.75
CX3CL1P78423 U3.2-201ENST00000362981 210 ntBASIC4.1□□□□□ -1.75
CX3CL1P78423 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CL1P78423 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CL1P78423 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CL1P78423 MIR223-201ENST00000385204 110 ntBASIC4.1□□□□□ -1.75
CX3CL1P78423 DUTP5-201ENST00000406790 469 ntBASIC4.1□□□□□ -1.75
CX3CL1P78423 RNU6-272P-201ENST00000411028 104 ntBASIC4.1□□□□□ -1.75
CX3CL1P78423 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CL1P78423 AL356320.2-201ENST00000417263 507 ntBASIC4.1□□□□□ -1.75
CX3CL1P78423 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.1□□□□□ -1.75
CX3CL1P78423 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CL1P78423 AL513175.2-201ENST00000422071 443 ntBASIC4.1□□□□□ -1.75
CX3CL1P78423 EI24P4-201ENST00000423683 1078 ntBASIC4.1□□□□□ -1.75
CX3CL1P78423 AC009238.2-201ENST00000431026 355 ntBASIC4.1□□□□□ -1.75
CX3CL1P78423 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CL1P78423 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CL1P78423 GEMIN8P3-201ENST00000445417 720 ntBASIC4.1□□□□□ -1.75
CX3CL1P78423 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.1□□□□□ -1.75
CX3CL1P78423 RN7SL172P-201ENST00000460535 303 ntBASIC4.1□□□□□ -1.75
CX3CL1P78423 AP000942.1-201ENST00000463969 747 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms