Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.68□□□□□ -1.82
CLDN12P56749 AL133243.1-201ENST00000614487 366 ntBASIC3.68□□□□□ -1.82
CLDN12P56749 AL021997.2-201ENST00000615674 271 ntBASIC3.68□□□□□ -1.82
CLDN12P56749 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN12P56749 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN12P56749 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN12P56749 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN12P56749 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN12P56749 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN12P56749 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
CLDN12P56749 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CLDN12P56749 AC027287.1-201ENST00000553115 1453 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN12P56749 AC090229.1-201ENST00000590983 1609 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN12P56749 AC093311.1-201ENST00000506586 2021 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN12P56749 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CLDN12P56749 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CLDN12P56749 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN12P56749 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN12P56749 RNA5SP175-201ENST00000364275 119 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN12P56749 SNORA37-201ENST00000384504 129 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 MIR92A2-201ENST00000385299 75 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 MIR3065-201ENST00000390137 79 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 AL583835.1-201ENST00000399570 407 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 SNORA3C-201ENST00000408792 125 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 RN7SKP222-201ENST00000410651 315 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN12P56749 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN12P56749 CYP4F29P-201ENST00000420685 446 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 RPL7AP25-201ENST00000423357 805 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN12P56749 CEACAMP1-201ENST00000434624 1035 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 GSTA7P-201ENST00000438425 448 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN12P56749 AC091685.2-201ENST00000454924 864 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN12P56749 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN12P56749 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN12P56749 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN12P56749 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN12P56749 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 EIF4EP5-201ENST00000528228 640 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN12P56749 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN12P56749 HMGN2P6-201ENST00000551091 273 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN12P56749 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN12P56749 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.67□□□□□ -1.82
CLDN12P56749 AC079587.1-201ENST00000603846 277 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 AL096803.3-201ENST00000609032 532 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN12P56749 MIR6862-1-201ENST00000613016 70 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 MIR6862-2-201ENST00000614755 70 ntBASIC3.67□□□□□ -1.82
CLDN12P56749 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN12P56749 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.67□□□□□ -1.82
CLDN12P56749 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN12P56749 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CLDN12P56749 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CLDN12P56749 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN12P56749 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN12P56749 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN12P56749 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CLDN12P56749 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN12P56749 AC017007.4-201ENST00000503353 1352 ntBASIC3.66□□□□□ -1.82
CLDN12P56749 MTCO1P11-201ENST00000429111 1528 ntBASIC3.66□□□□□ -1.82
CLDN12P56749 AC134882.1-201ENST00000603738 1676 ntBASIC3.66□□□□□ -1.82
CLDN12P56749 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CLDN12P56749 RNU6-1251P-201ENST00000364502 107 ntBASIC3.66□□□□□ -1.82
CLDN12P56749 RN7SKP269-201ENST00000365545 319 ntBASIC3.66□□□□□ -1.82
CLDN12P56749 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN12P56749 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CLDN12P56749 SNORD65-201ENST00000391079 73 ntBASIC3.66□□□□□ -1.82
CLDN12P56749 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CLDN12P56749 RPL31P52-201ENST00000407532 367 ntBASIC3.66□□□□□ -1.82
CLDN12P56749 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN12P56749 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.66□□□□□ -1.82
CLDN12P56749 VDAC1P6-201ENST00000430062 855 ntBASIC3.66□□□□□ -1.82
CLDN12P56749 LYPLA1P1-201ENST00000434514 622 ntBASIC3.66□□□□□ -1.82
CLDN12P56749 PSMD10P3-201ENST00000437000 448 ntBASIC3.66□□□□□ -1.82
CLDN12P56749 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN12P56749 TPTE2P3-201ENST00000441562 1189 ntBASIC3.66□□□□□ -1.82
CLDN12P56749 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN12P56749 RPL23AP71-201ENST00000470966 469 ntBASIC3.66□□□□□ -1.82
CLDN12P56749 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN12P56749 KATNBL1P4-201ENST00000503545 918 ntBASIC3.66□□□□□ -1.82
CLDN12P56749 AC093763.2-201ENST00000505334 1223 ntBASIC3.66□□□□□ -1.82
CLDN12P56749 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN12P56749 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.66□□□□□ -1.82
CLDN12P56749 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN12P56749 OR7H2P-201ENST00000513483 306 ntBASIC3.66□□□□□ -1.82
CLDN12P56749 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN12P56749 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN12P56749 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CLDN12P56749 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN12P56749 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN12P56749 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN12P56749 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms