Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AL021997.2-201ENST00000615674 271 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.21□□□□□ -1.74
PKNOX1P55347 AC074276.2-201ENST00000619891 348 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.21□□□□□ -1.74
PKNOX1P55347 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.21□□□□□ -1.74
PKNOX1P55347 AC119674.1-220ENST00000641502 1048 ntBASIC4.21□□□□□ -1.74
PKNOX1P55347 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.21□□□□□ -1.74
PKNOX1P55347 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PKNOX1P55347 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PKNOX1P55347 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PKNOX1P55347 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.21□□□□□ -1.74
PKNOX1P55347 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PKNOX1P55347 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PKNOX1P55347 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PKNOX1P55347 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PKNOX1P55347 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
PKNOX1P55347 AL451142.2-201ENST00000429076 2090 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.2□□□□□ -1.74
PKNOX1P55347 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PKNOX1P55347 OR4K15-201ENST00000305051 1216 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PKNOX1P55347 RNU1-130P-201ENST00000363930 160 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 RNA5SP175-201ENST00000364275 119 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 AC083799.1-201ENST00000366451 910 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 AL034374.1-201ENST00000406329 351 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 AMZ2P2-201ENST00000406819 1057 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 RNA5SP306-201ENST00000411087 107 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 AL360081.1-201ENST00000428299 555 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 BX119904.1-201ENST00000432026 348 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 CACYBPP1-201ENST00000438592 684 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.2□□□□□ -1.74
PKNOX1P55347 RPL12P3-201ENST00000440080 396 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 AL121877.1-201ENST00000453704 622 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.2□□□□□ -1.74
PKNOX1P55347 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.2□□□□□ -1.74
PKNOX1P55347 RPL35AP15-201ENST00000468042 339 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 RPS6P4-201ENST00000494693 758 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 AC108145.1-201ENST00000503770 153 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.2□□□□□ -1.74
PKNOX1P55347 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.2□□□□□ -1.74
PKNOX1P55347 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.2□□□□□ -1.74
PKNOX1P55347 OR5BC1P-201ENST00000529327 739 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 OR5D15P-201ENST00000531671 942 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 UBTFL9-201ENST00000534504 1148 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
PKNOX1P55347 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PKNOX1P55347 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.2□□□□□ -1.74
PKNOX1P55347 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.2□□□□□ -1.74
PKNOX1P55347 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.2□□□□□ -1.74
PKNOX1P55347 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 AC074029.2-201ENST00000551045 634 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 AC021483.2-201ENST00000567415 758 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.2□□□□□ -1.74
PKNOX1P55347 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.2□□□□□ -1.74
PKNOX1P55347 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PKNOX1P55347 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.2□□□□□ -1.74
PKNOX1P55347 AC115286.1-201ENST00000604298 434 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.2□□□□□ -1.74
PKNOX1P55347 AC004948.1-201ENST00000609858 672 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 MIR6719-201ENST00000622428 87 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PKNOX1P55347 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.2□□□□□ -1.74
PKNOX1P55347 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PKNOX1P55347 OR56B2P-202ENST00000641377 2453 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PKNOX1P55347 IQCB2P-201ENST00000401788 1633 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.2□□□□□ -1.74
PKNOX1P55347 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PKNOX1P55347 DHX40P1-201ENST00000588725 1412 ntBASIC4.2□□□□□ -1.74
PKNOX1P55347 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PKNOX1P55347 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
PKNOX1P55347 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PKNOX1P55347 AL592148.3-201ENST00000608771 2646 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.19□□□□□ -1.74
PKNOX1P55347 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.19□□□□□ -1.74
PKNOX1P55347 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PKNOX1P55347 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PKNOX1P55347 AC097374.1-203ENST00000400783 485 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.19□□□□□ -1.74
PKNOX1P55347 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.19□□□□□ -1.74
PKNOX1P55347 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.19□□□□□ -1.74
PKNOX1P55347 AL139095.3-201ENST00000419672 1203 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.19□□□□□ -1.74
PKNOX1P55347 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 RPS26P47-201ENST00000427219 348 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 USP9YP9-201ENST00000429406 715 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 CLIC4P1-201ENST00000453177 535 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 RPL7P22-201ENST00000466005 733 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 AC104164.2-201ENST00000496953 495 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 AC105233.1-201ENST00000498840 781 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.19□□□□□ -1.74
PKNOX1P55347 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.19□□□□□ -1.74
PKNOX1P55347 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.19□□□□□ -1.74
PKNOX1P55347 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.19□□□□□ -1.74
PKNOX1P55347 AC017037.1-201ENST00000508460 471 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 AC021146.7-201ENST00000509604 775 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.19□□□□□ -1.74
PKNOX1P55347 VTA1P2-201ENST00000520205 911 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms